Gm4479 Pseudogene Detail

Summary

• Symbol
  Gm4479
• Name
  predicted gene 4479

• Feature Type
  pseudogene
• IDs
  MGI:3782663
  NCBI Gene: 100043499
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:57024974-57025144 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 28.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782663	pseudogene	Chr14:57024886-57025387 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011116	pseudogene	Chr14:50890015-50890185 (-)
A/J	MGP_AJ_G0011115	pseudogene	Chr14:49874030-49874200 (-)
AKR/J	MGP_AKRJ_G0011075	pseudogene	Chr14:51681173-51681343 (-)
BALB/cJ	MGP_BALBcJ_G0011085	pseudogene	Chr14:49864026-49864196 (-)
C3H/HeJ	MGP_C3HHeJ_G0010986	pseudogene	Chr14:51319266-51319436 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011379	pseudogene	Chr14:53423181-53423351 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012497	pseudogene	ChrX:148319-148491 (-)
CAST/EiJ	MGP_CASTEiJ_G0010801	pseudogene	Chr14:47650981-47651153 (-)
CBA/J	MGP_CBAJ_G0010963	pseudogene	Chr14:55001779-55001949 (-)
DBA/2J	MGP_DBA2J_G0011010	pseudogene	Chr14:49593262-49593432 (-)
FVB/NJ	MGP_FVBNJ_G0011013	pseudogene	Chr14:48986557-48986727 (-)
LP/J	MGP_LPJ_G0011095	pseudogene	Chr14:51956742-51956912 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011004	pseudogene	Chr14:54403405-54403575 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011355	pseudogene	Chr14:50814556-50814726 (-)
PWK/PhJ	MGP_PWKPhJ_G0010670	pseudogene	Chr14:46114522-46114692 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010580	pseudogene	Chr15:80533773-80533942 (+)
WSB/EiJ	MGP_WSBEiJ_G0010852	pseudogene	Chr14:51153618-51153790 (-)

Homology

• Gene Tree
  Gm4479
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm4479
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000094250 (Evidence)
• NCBI Gene
  100043499

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094250	Ensembl Gene Model | MGI Sequence Detail	171	C57BL/6J
transcript	ENSMUST00000178807	Ensembl | MGI Sequence Detail	171	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;