Gm15493 Pseudogene Detail

Summary

• Symbol
  Gm15493
• Name
  predicted gene 15493
• Synonyms
  EG666850

• Feature Type
  pseudogene
• IDs
  MGI:3782939
  NCBI Gene: 666850
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:92216605-92217132 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 48.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782939	pseudogene	Chr9:92216602-92217132 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014212	pseudogene	Chr9:93388314-93388841 (-)
A/J	MGP_AJ_G0014229	pseudogene	Chr9:90156224-90156751 (-)
AKR/J	MGP_AKRJ_G0014155	pseudogene	Chr9:92253182-92253709 (-)
BALB/cJ	MGP_BALBcJ_G0014179	pseudogene	Chr9:89804225-89804752 (-)
C3H/HeJ	MGP_C3HHeJ_G0014011	pseudogene	Chr9:92726386-92726913 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014629	pseudogene	Chr9:96008342-96008869 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012445	pseudogene	Chr9:88169529-88170056 (-)
CAST/EiJ	MGP_CASTEiJ_G0013665	pseudogene	Chr9:92464943-92465475 (-)
CBA/J	MGP_CBAJ_G0013993	pseudogene	Chr9:99337015-99337542 (-)
DBA/2J	MGP_DBA2J_G0014077	pseudogene	Chr9:89673720-89674247 (-)
FVB/NJ	MGP_FVBNJ_G0014074	pseudogene	Chr9:88637530-88638057 (-)
LP/J	MGP_LPJ_G0014162	pseudogene	Chr9:93585595-93586122 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014109	pseudogene	Chr9:101270933-101271460 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014600	pseudogene	Chr9:92535790-92536317 (-)
PWK/PhJ	MGP_PWKPhJ_G0013479	pseudogene	Chr9:89830429-89830956 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013268	pseudogene	Chr9:92581752-92582284 (-)
WSB/EiJ	MGP_WSBEiJ_G0013724	pseudogene	Chr9:92411795-92412322 (-)

Homology

• Gene Tree
  Gm15493
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15493
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082623 (Evidence)
• NCBI Gene
  666850

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082623	Ensembl Gene Model | MGI Sequence Detail	528	C57BL/6J
transcript	ENSMUST00000119461	Ensembl | MGI Sequence Detail	528	Not Applicable

Other
Accession IDs

MGI:3644665

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;