Gm15526 Pseudogene Detail

Summary

• Symbol
  Gm15526
• Name
  predicted gene 15526
• Synonyms
  EG666305

• Feature Type
  pseudogene
• IDs
  MGI:3782973
  NCBI Gene: 108169144
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:54154465-54154668 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 26.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782973	pseudogene	Chr6:54154182-54154702 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0013451	pseudogene	Chr6:51036557-51037530 (-)
AKR/J	MGP_AKRJ_G0013416	pseudogene	Chr6:52769900-52771868 (-)
BALB/cJ	MGP_BALBcJ_G0013430	pseudogene	Chr6:51388407-51388784 (-)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012986	pseudogene	Chr6:52633693-52633892 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0013328	pseudogene	Chr6:50528318-50528521 (-)
LP/J	MGP_LPJ_G0013402	pseudogene	Chr6:53464781-53465035 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013348	pseudogene	Chr6:59505351-59505549 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013811	pseudogene	Chr6:52722409-52722612 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15526
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12

• Ensembl
  ENSMUSG00000080205 (Evidence)
• NCBI Gene
  108169144

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080205	Ensembl Gene Model | MGI Sequence Detail	204	C57BL/6J
transcript	ENSMUST00000112504	Ensembl | MGI Sequence Detail	204	Not Applicable

Other
Accession IDs

MGI:3644139

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;