Gm15530 Pseudogene Detail

Summary

• Symbol
  Gm15530
• Name
  predicted gene 15530

• Feature Type
  pseudogene
• IDs
  MGI:3782978
  NCBI Gene: 100417700
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:38505677-38506231 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 26.87 cM

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782978	pseudogene	Chr16:38505492-38506318 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011276	pseudogene	Chr16:37230993-37231547 (-)
A/J	MGP_AJ_G0011263	pseudogene	Chr16:35387751-35388305 (-)
AKR/J	MGP_AKRJ_G0011225	pseudogene	Chr16:36725458-36726012 (-)
BALB/cJ	MGP_BALBcJ_G0011232	pseudogene	Chr16:35500404-35500958 (-)
C3H/HeJ	MGP_C3HHeJ_G0011129	pseudogene	Chr16:36828958-36829512 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011524	pseudogene	Chr16:38075473-38076027 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010112	pseudogene	Chr16:35761540-35762094 (-)
CAST/EiJ	MGP_CASTEiJ_G0010956	pseudogene	Chr16:36986317-36986871 (-)
CBA/J	MGP_CBAJ_G0011109	pseudogene	Chr16:39746771-39747325 (-)
DBA/2J	MGP_DBA2J_G0011157	pseudogene	Chr16:35265275-35265829 (-)
FVB/NJ	MGP_FVBNJ_G0011158	pseudogene	Chr16:35293244-35293798 (-)
LP/J	MGP_LPJ_G0011251	pseudogene	Chr16:36906100-36906654 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011151	pseudogene	Chr16:38846362-38846916 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011505	pseudogene	Chr16:36692966-36693520 (-)
PWK/PhJ	MGP_PWKPhJ_G0010827	pseudogene	Chr16:35681977-35682531 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010655	pseudogene	Chr16:36588701-36589255 (-)
WSB/EiJ	MGP_WSBEiJ_G0010998	pseudogene	Chr16:36758587-36759141 (-)

Homology

• Gene Tree
  Gm15530
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081651 (Evidence)
• NCBI Gene
  100417700

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081651	Ensembl Gene Model | MGI Sequence Detail	555	C57BL/6J
transcript	ENSMUST00000122206	Ensembl | MGI Sequence Detail	555	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;