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Gm15540 Gene Detail
Summary
  • Symbol
    Gm15540
  • Name
    predicted gene 15540
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3782988
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:142449422-142450442 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 66.69 cM
Strain
Comparison
more
  • SNPs within 2kb
    195 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782988
 lncRNA gene Chr3:142449422-142450442 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003852
 antisense lncRNA gene Chr3:145956112-145957131 (-)
A/J MGP_AJ_G0003832
 antisense lncRNA gene Chr3:140787136-140788155 (-)
AKR/J MGP_AKRJ_G0003809
 antisense lncRNA gene Chr3:144541107-144542101 (-)
BALB/cJ MGP_BALBcJ_G0003819
 antisense lncRNA gene Chr3:140597916-140598935 (-)
C3H/HeJ MGP_C3HHeJ_G0003766
 antisense lncRNA gene Chr3:144856660-144857679 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003962
 antisense lncRNA gene Chr3:151022918-151023938 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003463
 antisense lncRNA gene Chr3:136000480-136001501 (-)
CAST/EiJ MGP_CASTEiJ_G0003731
 antisense lncRNA gene Chr3:144835821-144836847 (-)
CBA/J MGP_CBAJ_G0003759
 antisense lncRNA gene Chr3:156309925-156310944 (-)
DBA/2J MGP_DBA2J_G0003773
 antisense lncRNA gene Chr3:139950288-139951282 (-)
FVB/NJ MGP_FVBNJ_G0003794
 antisense lncRNA gene Chr3:137375658-137376652 (-)
LP/J MGP_LPJ_G0003854
 antisense lncRNA gene Chr3:147385319-147386338 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003781
 antisense lncRNA gene Chr3:164590449-164591443 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003963
 antisense lncRNA gene Chr3:144161269-144162263 (-)
PWK/PhJ MGP_PWKPhJ_G0003686
 antisense lncRNA gene Chr3:139766816-139767838 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003631
 antisense lncRNA gene Chr3:142310783-142311804 (-)
WSB/EiJ MGP_WSBEiJ_G0003767
 antisense lncRNA gene Chr3:145036142-145037161 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086561 Ensembl Gene Model | MGI Sequence Detail 1021 C57BL/6J ±  kb
transcript ENSMUST00000136052 Ensembl | MGI Sequence Detail 674 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory