Gm15550 Pseudogene Detail

Summary

• Symbol
  Gm15550
• Name
  predicted gene 15550
• Synonyms
  EG665747

• Feature Type
  pseudogene
• IDs
  MGI:3782999
  NCBI Gene: 665747
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:43350739-43352486 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 21.20 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782999	pseudogene	Chr6:43350663-43352683 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013427	pseudogene	Chr6:42009785-42011532 (+)
A/J	MGP_AJ_G0013412	pseudogene	Chr6:40157466-40159213 (+)
AKR/J	MGP_AKRJ_G0013375	pseudogene	Chr6:41494234-41495981 (+)
BALB/cJ	MGP_BALBcJ_G0013389	pseudogene	Chr6:40443359-40445106 (+)
C3H/HeJ	MGP_C3HHeJ_G0013240	pseudogene	Chr6:41497547-41499294 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013772	pseudogene	Chr6:43009523-43011270 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011868	pseudogene	Chr6:38057886-38059632 (+)
CAST/EiJ	MGP_CASTEiJ_G0012948	pseudogene	Chr6:41268619-41270366 (+)
CBA/J	MGP_CBAJ_G0013208	pseudogene	Chr6:44758144-44759891 (+)
DBA/2J	MGP_DBA2J_G0013292	pseudogene	Chr6:40028226-40029973 (+)
FVB/NJ	MGP_FVBNJ_G0013288	pseudogene	Chr6:39749957-39751704 (+)
LP/J	MGP_LPJ_G0013360	pseudogene	Chr6:41995429-41997176 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013306	pseudogene	Chr6:47082385-47084132 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013767	pseudogene	Chr6:41421061-41422808 (+)
PWK/PhJ	MGP_PWKPhJ_G0012761	pseudogene	Chr6:39571832-39573769 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012541	pseudogene	Chr6:40970179-40971926 (+)
WSB/EiJ	MGP_WSBEiJ_G0012990	pseudogene	Chr6:41389389-41391136 (+)

Homology

• Gene Tree
  Gm15550
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084325 (Evidence)
• NCBI Gene
  665747

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084325	Ensembl Gene Model | MGI Sequence Detail	1748	C57BL/6J
transcript	ENSMUST00000120824	Ensembl | MGI Sequence Detail	1748	Not Applicable

Other
Accession IDs

MGI:3645845

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;