Gm15594 Gene Detail

Summary

• Symbol
  Gm15594
• Name
  predicted gene 15594

• Feature Type
  lncRNA gene
• IDs
  MGI:3783041
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:18424683-18427884 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 8.12 cM

Strain
Comparison

• SNPs within 2kb
  215 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783041	lncRNA gene	Chr6:18424683-18427884 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004237	antisense lncRNA gene	Chr6:15727482-15730648 (+)
A/J	MGP_AJ_G0004215	antisense lncRNA gene	Chr6:15077811-15081008 (+)
AKR/J	MGP_AKRJ_G0004196	antisense lncRNA gene	Chr6:15603685-15606884 (+)
BALB/cJ	MGP_BALBcJ_G0004202	antisense lncRNA gene	Chr6:15166470-15169671 (+)
C3H/HeJ	MGP_C3HHeJ_G0004150	antisense lncRNA gene	Chr6:15473076-15476277 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004351	antisense lncRNA gene	Chr6:16230445-16233646 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003824	antisense lncRNA gene	Chr6:14004964-14008365 (+)
CAST/EiJ	MGP_CASTEiJ_G0004112	antisense lncRNA gene	Chr6:15389181-15392360 (+)
CBA/J	MGP_CBAJ_G0004144	antisense lncRNA gene	Chr6:16751783-16754984 (+)
DBA/2J	MGP_DBA2J_G0004160	antisense lncRNA gene	Chr6:15000091-15003292 (+)
FVB/NJ	MGP_FVBNJ_G0004176	antisense lncRNA gene	Chr6:14838423-14841624 (+)
LP/J	MGP_LPJ_G0004238	antisense lncRNA gene	Chr6:15815460-15818626 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004166	antisense lncRNA gene	Chr6:17910991-17914157 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004348	antisense lncRNA gene	Chr6:15487133-15490329 (+)
PWK/PhJ	MGP_PWKPhJ_G0004065	antisense lncRNA gene	Chr6:14673449-14676653 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004009	antisense lncRNA gene	Chr6:15377138-15380289 (+)
WSB/EiJ	MGP_WSBEiJ_G0004148	antisense lncRNA gene	Chr6:15420697-15423888 (+)

Homology

• Gene Tree
  Gm15594
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084947 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084947	Ensembl Gene Model | MGI Sequence Detail	3202	C57BL/6J
transcript	ENSMUST00000137958	Ensembl | MGI Sequence Detail	2215	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;