Gm15601 MGI Mouse Gene Detail - MGI:3783048

Sequence Map

Chr14:45800485-45830745 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783048	lncRNA gene	Chr14:45800485-45835969 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003240	antisense lncRNA gene	Chr14:39226073-39236822 (+)
A/J	MGP_AJ_G0003216	antisense lncRNA gene	Chr14:38072970-38083705 (+)
AKR/J	MGP_AKRJ_G0003199	antisense lncRNA gene	Chr14:39564148-39574883 (+)
BALB/cJ	MGP_BALBcJ_G0003203	antisense lncRNA gene	Chr14:38116846-38127578 (+)
C3H/HeJ	MGP_C3HHeJ_G0003158	antisense lncRNA gene	Chr14:39362526-39373269 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003347	antisense lncRNA gene	Chr14:40948103-40958874 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002872	antisense lncRNA gene	Chr14:37477224-37488191 (+)
CAST/EiJ	MGP_CASTEiJ_G0003124	antisense lncRNA gene	Chr14:36479645-36490383 (+)
CBA/J	MGP_CBAJ_G0003155	antisense lncRNA gene	Chr14:42240595-42251329 (+)
DBA/2J	MGP_DBA2J_G0003160	antisense lncRNA gene	Chr14:37983292-37994066 (+)
FVB/NJ	MGP_FVBNJ_G0003179	antisense lncRNA gene	Chr14:37744550-37755284 (+)
LP/J	MGP_LPJ_G0003237	antisense lncRNA gene	Chr14:39500964-39512043 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003168	antisense lncRNA gene	Chr14:41632850-41643589 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003347	antisense lncRNA gene	Chr14:39100978-39111729 (+)
PWK/PhJ	MGP_PWKPhJ_G0003082	antisense lncRNA gene	Chr14:34851049-34861886 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003028	antisense lncRNA gene	Chr14:35258450-35268330 (+)
WSB/EiJ	MGP_WSBEiJ_G0003158	antisense lncRNA gene	Chr14:39202899-39213691 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	115488342	NCBI Gene Model \| MGI Sequence Detail	30261	C57BL/6J	± kb
	transcript	XR_003951189	RefSeq \| MGI Sequence Detail	8565	C57BL/6J

Summaries

All 14

Diseases 1

Phenotypes 8
Earliest

J:156741 Kuo YM, et al., Extensive enteric nervous system abnormalities in mice transgenic for artificial chromosomes containing Parkinson disease-associated alpha-synuclein gene mutations precede central nervous system changes. Hum Mol Genet. 2010 May 1;19(9):1633-50
Latest

J:344232 Chandra R, et al., Gut mucosal cells transfer alpha-synuclein to the vagus nerve. JCI Insight. 2023;8(23):e172192

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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