Gm15604 Pseudogene Detail

Summary

• Symbol
  Gm15604
• Name
  predicted gene 15604

• Feature Type
  pseudogene
• IDs
  MGI:3783051
  NCBI Gene: 100416202
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:10624138-10624701 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 2.48 cM

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783051	pseudogene	Chr1:10624138-10625778 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0009996	pseudogene	Chr1:7847495-7848944 (-)
A/J	MGP_AJ_G0009977	pseudogene	Chr1:7889520-7890987 (-)
AKR/J	MGP_AKRJ_G0009959	pseudogene	Chr1:7767919-7769382 (-)
BALB/cJ	MGP_BALBcJ_G0009965	pseudogene	Chr1:7623196-7624651 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0010214	pseudogene	Chr1:8178222-8179677 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008994	pseudogene	Chr1:6695588-6697058 (-)
CAST/EiJ	MGP_CASTEiJ_G0009746	pseudogene	Chr1:7890255-7891696 (-)
CBA/J	MGP_CBAJ_G0009870	pseudogene	Chr1:8390989-8392434 (-)
DBA/2J	MGP_DBA2J_G0009894	pseudogene	Chr1:7491959-7493778 (-)
FVB/NJ	MGP_FVBNJ_G0009918	pseudogene	Chr1:7400975-7402440 (-)
LP/J	MGP_LPJ_G0009987	pseudogene	Chr1:8054204-8055683 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009878	pseudogene	Chr1:9016790-9018245 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010189	pseudogene	Chr1:7688054-7689794 (-)
PWK/PhJ	MGP_PWKPhJ_G0009650	pseudogene	Chr1:7354015-7355589 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009469	pseudogene	Chr1:7851574-7853022 (-)
WSB/EiJ	MGP_WSBEiJ_G0009808	pseudogene	Chr1:7691680-7693145 (-)

Homology

• Gene Tree
  Gm15604
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083422 (Evidence)
• NCBI Gene
  100416202

Representative Sequences			Length	Strain/Species
genomic	100416202	NCBI Gene Model | MGI Sequence Detail	564	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;