Gm15606 Gene Detail

Summary

• Symbol
  Gm15606
• Name
  predicted gene 15606

• Feature Type
  lncRNA gene
• IDs
  MGI:3783053
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:28109183-28110817 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 14.32 cM

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783053	lncRNA gene	Chr9:28109183-28110817 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037089	sense intronic lncRNA gene	Chr9:25711123-25712757 (+)
A/J	MGP_AJ_G0037077	sense intronic lncRNA gene	Chr9:25122583-25124217 (+)
AKR/J	MGP_AKRJ_G0037024	sense intronic lncRNA gene	Chr9:25622729-25624363 (+)
BALB/cJ	MGP_BALBcJ_G0037068	sense intronic lncRNA gene	Chr9:25026630-25028264 (+)
C3H/HeJ	MGP_C3HHeJ_G0036755	sense intronic lncRNA gene	Chr9:26003130-26004764 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037580	sense intronic lncRNA gene	Chr9:26639450-26641084 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034624	sense intronic lncRNA gene	Chr9:24014301-24015901 (+)
CAST/EiJ	MGP_CASTEiJ_G0035941	sense intronic lncRNA gene	Chr9:25820054-25821683 (+)
CBA/J	MGP_CBAJ_G0036730	sense intronic lncRNA gene	Chr9:27584942-27586579 (+)
DBA/2J	MGP_DBA2J_G0036905	sense intronic lncRNA gene	Chr9:25144784-25146418 (+)
FVB/NJ	MGP_FVBNJ_G0036855	sense intronic lncRNA gene	Chr9:24559237-24560871 (+)
LP/J	MGP_LPJ_G0036952	sense intronic lncRNA gene	Chr9:25896249-25897883 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036862	sense intronic lncRNA gene	Chr9:29257257-29258891 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037698	sense intronic lncRNA gene	Chr9:25628840-25630474 (+)
PWK/PhJ	MGP_PWKPhJ_G0035635	sense intronic lncRNA gene	Chr9:25065964-25067601 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035443	sense intronic lncRNA gene	Chr9:25718694-25720336 (+)
WSB/EiJ	MGP_WSBEiJ_G0036143	sense intronic lncRNA gene	Chr9:25376681-25378315 (+)

Homology

• Gene Tree
  Gm15606
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000087531 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087531	Ensembl Gene Model | MGI Sequence Detail	1635	C57BL/6J
transcript	ENSMUST00000139851	Ensembl | MGI Sequence Detail	711	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;