Gm15607 Pseudogene Detail

Summary

• Symbol
  Gm15607
• Name
  predicted gene 15607

• Feature Type
  pseudogene
• IDs
  MGI:3783054
  NCBI Gene: 100502746
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:135665993-135666350 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 75.32 cM

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783054	pseudogene	Chr5:135665974-135666351 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013274	pseudogene	Chr5:140198980-140200981 (-)
A/J	MGP_AJ_G0013255	pseudogene	Chr5:134188218-134188575 (-)
AKR/J	MGP_AKRJ_G0013221	pseudogene	Chr5:138536848-138537205 (-)
BALB/cJ	MGP_BALBcJ_G0013235	pseudogene	Chr5:135542358-135542715 (-)
C3H/HeJ	MGP_C3HHeJ_G0013084	pseudogene	Chr5:139101432-139101789 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013602	pseudogene	Chr5:145425967-145426324 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012807	pseudogene	Chr5:138510527-138510884 (-)
CBA/J	MGP_CBAJ_G0013052	pseudogene	Chr5:151101541-151101898 (-)
DBA/2J	MGP_DBA2J_G0013135	pseudogene	Chr5:134081169-134081526 (-)
FVB/NJ	MGP_FVBNJ_G0013134	pseudogene	Chr5:133233033-133233390 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0013152	pseudogene	Chr5:154099116-154099473 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013604	pseudogene	Chr5:138300053-138300410 (-)
PWK/PhJ	MGP_PWKPhJ_G0012621	pseudogene	Chr5:133124999-133125356 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012410	pseudogene	Chr5:135842656-135843015 (-)
WSB/EiJ	MGP_WSBEiJ_G0012845	pseudogene	Chr5:139033367-139038468 (-)

Homology

• Gene Tree
  Gm15607
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000082001 (Evidence)
• NCBI Gene
  100502746

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082001	Ensembl Gene Model | MGI Sequence Detail	358	C57BL/6J
transcript	ENSMUST00000119632	Ensembl | MGI Sequence Detail	358	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;