Gm15625 Pseudogene Detail

Summary

• Symbol
  Gm15625
• Name
  predicted gene 15625

• Feature Type
  pseudogene
• IDs
  MGI:3783069
  NCBI Gene: 100417392
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:55212572-55213664 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 29.96 cM

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783069	pseudogene	Chr9:55212572-55213667 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014144	pseudogene	Chr9:54398567-54399659 (+)
A/J	MGP_AJ_G0014164	pseudogene	Chr9:52645925-52647017 (+)
AKR/J	MGP_AKRJ_G0014087	pseudogene	Chr9:53851806-53852898 (+)
BALB/cJ	MGP_BALBcJ_G0014113	pseudogene	Chr9:52419025-52420117 (+)
C3H/HeJ	MGP_C3HHeJ_G0013943	pseudogene	Chr9:54311292-54312384 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014557	pseudogene	Chr9:55909413-55910505 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012398	pseudogene	Chr9:52047968-52049088 (+)
CAST/EiJ	MGP_CASTEiJ_G0013601	pseudogene	Chr9:54347697-54348791 (+)
CBA/J	MGP_CBAJ_G0013926	pseudogene	Chr9:57856971-57858063 (+)
DBA/2J	MGP_DBA2J_G0014009	pseudogene	Chr9:52537280-52538372 (+)
FVB/NJ	MGP_FVBNJ_G0014009	pseudogene	Chr9:51737985-51739077 (+)
LP/J	MGP_LPJ_G0014092	pseudogene	Chr9:54703732-54704824 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014038	pseudogene	Chr9:59372874-59373966 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014530	pseudogene	Chr9:53869287-53870379 (+)
PWK/PhJ	MGP_PWKPhJ_G0013420	pseudogene	Chr9:52522989-52524080 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013204	pseudogene	Chr9:54133029-54134118 (+)
WSB/EiJ	MGP_WSBEiJ_G0013661	pseudogene	Chr9:53824489-53825581 (+)

Homology

• Gene Tree
  Gm15625
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082744 (Evidence)
• NCBI Gene
  100417392

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082744	Ensembl Gene Model | MGI Sequence Detail	1093	C57BL/6J
transcript	ENSMUST00000117617	Ensembl | MGI Sequence Detail	1093	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;