Gm15651 Gene Detail

Summary

• Symbol
  Gm15651
• Name
  predicted gene 15651

• Feature Type
  lncRNA gene
• IDs
  MGI:3783095
  NCBI Gene: 102631543
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:22367303-22369899 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 13.44 cM

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783095	lncRNA gene	Chr16:22362662-22369899 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015315	unclassified non-coding RNA gene	Chr16:20059559-20062155 (+)
A/J	MGP_AJ_G0015290	unclassified non-coding RNA gene	Chr16:19085844-19088440 (+)
AKR/J	MGP_AKRJ_G0015253	unclassified non-coding RNA gene	Chr16:19884568-19887164 (+)
BALB/cJ	MGP_BALBcJ_G0015253	unclassified non-coding RNA gene	Chr16:19283786-19286382 (+)
C3H/HeJ	MGP_C3HHeJ_G0015077	unclassified non-coding RNA gene	Chr16:19996478-19999074 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015707	unclassified non-coding RNA gene	Chr16:20495158-20497754 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013449	unclassified non-coding RNA gene	Chr16:19779081-19782418 (+)
CAST/EiJ	MGP_CASTEiJ_G0014628	unclassified non-coding RNA gene	Chr16:19985783-19988393 (+)
CBA/J	MGP_CBAJ_G0015056	unclassified non-coding RNA gene	Chr16:21364075-21366671 (+)
DBA/2J	MGP_DBA2J_G0015151	unclassified non-coding RNA gene	Chr16:19066224-19068820 (+)
FVB/NJ	MGP_FVBNJ_G0015158	unclassified non-coding RNA gene	Chr16:19030833-19033429 (+)
LP/J	MGP_LPJ_G0015231	unclassified non-coding RNA gene	Chr16:19810027-19812623 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015184	unclassified non-coding RNA gene	Chr16:20912507-20915103 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015747	unclassified non-coding RNA gene	Chr16:19840129-19842725 (+)
PWK/PhJ	MGP_PWKPhJ_G0014419	unclassified non-coding RNA gene	Chr16:19308774-19311402 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014206	unclassified non-coding RNA gene	Chr16:19623640-19626228 (+)
WSB/EiJ	MGP_WSBEiJ_G0014735	unclassified non-coding RNA gene	Chr16:19794403-19796998 (+)

Homology

• Gene Tree
  Gm15651
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000089663 (Evidence)
• NCBI Gene
  102631543

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089663	Ensembl Gene Model | MGI Sequence Detail	2597	C57BL/6J
transcript	ENSMUST00000159953	Ensembl | MGI Sequence Detail	2507	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm15651:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr137548	Chr16:22365704-22365740 (+)	-1,581 bp