Gm15666 Pseudogene Detail

Summary

• Symbol
  Gm15666
• Name
  predicted gene 15666

• Feature Type
  pseudogene
• IDs
  MGI:3783108
  NCBI Gene: 100416011
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:105341974-105342895 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 54.88 cM

Strain
Comparison

• SNPs within 2kb
  203 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783108	pseudogene	Chr10:105341974-105342961 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010544	pseudogene	Chr10:107607342-107608265 (-)
A/J	MGP_AJ_G0010538	pseudogene	Chr10:103610732-103611655 (-)
AKR/J	MGP_AKRJ_G0010498	pseudogene	Chr10:106634670-106635593 (-)
BALB/cJ	MGP_BALBcJ_G0010512	pseudogene	Chr10:104002143-104003066 (-)
C3H/HeJ	MGP_C3HHeJ_G0010435	pseudogene	Chr10:106669211-106670134 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010779	pseudogene	Chr10:111357330-111358253 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009450	pseudogene	Chr10:98650475-98651398 (-)
CAST/EiJ	MGP_CASTEiJ_G0010259	pseudogene	Chr10:106788453-106789376 (-)
CBA/J	MGP_CBAJ_G0010405	pseudogene	Chr10:115658744-115659667 (-)
DBA/2J	MGP_DBA2J_G0010436	pseudogene	Chr10:102715916-102716839 (-)
FVB/NJ	MGP_FVBNJ_G0010454	pseudogene	Chr10:101796403-101797326 (-)
LP/J	MGP_LPJ_G0010526	pseudogene	Chr10:108232347-108233270 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010431	pseudogene	Chr10:117950311-117951234 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010755	pseudogene	Chr10:106598997-106599920 (-)
PWK/PhJ	MGP_PWKPhJ_G0010160	pseudogene	Chr10:102792705-102793632 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009972	pseudogene	Chr10:105350288-105351215 (-)
WSB/EiJ	MGP_WSBEiJ_G0010324	pseudogene	Chr10:106707187-106708110 (-)

Homology

• Gene Tree
  Gm15666
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15666
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000084399 (Evidence)
• NCBI Gene
  100416011

Representative Sequences			Length	Strain/Species
genomic	100416011	NCBI Gene Model | MGI Sequence Detail	922	C57BL/6J
transcript	BB667236	GenBank | ENA | DDBJ | MGI Sequence Detail	641	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87