Gm15677 Gene Detail

Summary

• Symbol
  Gm15677
• Name
  predicted gene 15677

• Feature Type
  lncRNA gene
• IDs
  MGI:3783119
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:131755900-131757030 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 76.06 cM

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783119	lncRNA gene	Chr7:131755900-131757030 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004516	antisense lncRNA gene	Chr7:136838073-136839203 (+)
A/J	MGP_AJ_G0004496	antisense lncRNA gene	Chr7:133071072-133072202 (+)
AKR/J	MGP_AKRJ_G0004479	antisense lncRNA gene	Chr7:136611634-136612764 (+)
BALB/cJ	MGP_BALBcJ_G0004481	antisense lncRNA gene	Chr7:132751453-132752583 (+)
C3H/HeJ	MGP_C3HHeJ_G0004430	antisense lncRNA gene	Chr7:136452433-136453563 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004631	antisense lncRNA gene	Chr7:142037906-142039036 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004085	antisense lncRNA gene	Chr7:134338394-134339533 (+)
CAST/EiJ	MGP_CASTEiJ_G0004390	antisense lncRNA gene	Chr7:128319931-128321061 (+)
CBA/J	MGP_CBAJ_G0004425	antisense lncRNA gene	Chr7:146871045-146872175 (+)
DBA/2J	MGP_DBA2J_G0004439	antisense lncRNA gene	Chr7:131082714-131083844 (+)
FVB/NJ	MGP_FVBNJ_G0004456	antisense lncRNA gene	Chr7:130908741-130909871 (+)
LP/J	MGP_LPJ_G0004520	antisense lncRNA gene	Chr7:138327224-138328354 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004445	antisense lncRNA gene	Chr7:147830019-147831149 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004630	antisense lncRNA gene	Chr7:135601371-135602501 (+)
PWK/PhJ	MGP_PWKPhJ_G0004343	antisense lncRNA gene	Chr7:124092604-124093734 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004284	antisense lncRNA gene	Chr7:122388767-122389906 (+)
WSB/EiJ	MGP_WSBEiJ_G0004429	antisense lncRNA gene	Chr7:136505301-136506431 (+)

Homology

• Gene Tree
  Gm15677
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086814 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086814	Ensembl Gene Model | MGI Sequence Detail	1131	C57BL/6J
transcript	ENSMUST00000152302	Ensembl | MGI Sequence Detail	766	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;