Gm15693 Pseudogene Detail

Summary

• Symbol
  Gm15693
• Name
  predicted gene 15693

• Feature Type
  pseudogene
• IDs
  MGI:3783134
  NCBI Gene: 100416054
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:56578628-56579264 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 34.22 cM

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783134	pseudogene	Chr16:56578628-56579507 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011294	pseudogene	Chr16:55898547-55899183 (+)
A/J	MGP_AJ_G0011279	pseudogene	Chr16:53496266-53496902 (+)
AKR/J	MGP_AKRJ_G0011240	pseudogene	Chr16:55181329-55181965 (+)
BALB/cJ	MGP_BALBcJ_G0011253	pseudogene	Chr16:53594259-53594895 (+)
C3H/HeJ	MGP_C3HHeJ_G0011145	pseudogene	Chr16:55384189-55384825 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011539	pseudogene	Chr16:57482076-57482712 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010120	pseudogene	Chr16:53169882-53170514 (+)
CAST/EiJ	MGP_CASTEiJ_G0010969	pseudogene	Chr16:55771342-55771982 (+)
CBA/J	MGP_CBAJ_G0011123	pseudogene	Chr16:59777259-59777896 (+)
DBA/2J	MGP_DBA2J_G0011172	pseudogene	Chr16:53251664-53252300 (+)
FVB/NJ	MGP_FVBNJ_G0011174	pseudogene	Chr16:53014650-53015287 (+)
LP/J	MGP_LPJ_G0011265	pseudogene	Chr16:55711833-55712469 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011170	pseudogene	Chr16:60112466-60113102 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011522	pseudogene	Chr16:55357144-55357780 (+)
PWK/PhJ	MGP_PWKPhJ_G0010837	pseudogene	Chr16:53573574-53574212 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010664	pseudogene	Chr16:55106728-55107356 (+)
WSB/EiJ	MGP_WSBEiJ_G0011009	pseudogene	Chr16:55381363-55381999 (+)

Homology

• Gene Tree
  Gm15693
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082485 (Evidence)
• NCBI Gene
  100416054

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082485	Ensembl Gene Model | MGI Sequence Detail	637	C57BL/6J
transcript	ENSMUST00000120470	Ensembl | MGI Sequence Detail	637	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;