Gm15701 Gene Detail

Summary

• Symbol
  Gm15701
• Name
  predicted gene 15701

• Feature Type
  lncRNA gene
• IDs
  MGI:3783141
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:136131458-136133290 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 75.78 cM

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783141	lncRNA gene	Chr5:136131458-136133290 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004201	antisense lncRNA gene	Chr5:140726122-140727954 (-)
A/J	MGP_AJ_G0004180	antisense lncRNA gene	Chr5:134668563-134670395 (-)
AKR/J	MGP_AKRJ_G0004161	antisense lncRNA gene	Chr5:139021452-139023284 (-)
BALB/cJ	MGP_BALBcJ_G0004166	antisense lncRNA gene	Chr5:136026334-136028166 (-)
C3H/HeJ	MGP_C3HHeJ_G0004114	antisense lncRNA gene	Chr5:139641864-139643696 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004314	antisense lncRNA gene	Chr5:145957747-145959579 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003790	antisense lncRNA gene	Chr5:128953404-128955288 (-)
CAST/EiJ	MGP_CASTEiJ_G0004076	antisense lncRNA gene	Chr5:139042241-139044120 (-)
CBA/J	MGP_CBAJ_G0004108	antisense lncRNA gene	Chr5:151667967-151669799 (-)
DBA/2J	MGP_DBA2J_G0004124	antisense lncRNA gene	Chr5:134568832-134570664 (-)
FVB/NJ	MGP_FVBNJ_G0004140	antisense lncRNA gene	Chr5:133722910-133724742 (-)
LP/J	MGP_LPJ_G0004202	antisense lncRNA gene	Chr5:141154080-141155912 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004130	antisense lncRNA gene	Chr5:154637047-154638879 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004312	antisense lncRNA gene	Chr5:138832524-138834356 (-)
PWK/PhJ	MGP_PWKPhJ_G0004030	antisense lncRNA gene	Chr5:133627382-133629263 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003973	antisense lncRNA gene	Chr5:136387605-136389446 (-)
WSB/EiJ	MGP_WSBEiJ_G0004112	antisense lncRNA gene	Chr5:139561618-139563450 (-)

Homology

• Gene Tree
  Gm15701
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086656 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086656	Ensembl Gene Model | MGI Sequence Detail	1833	C57BL/6J
transcript	ENSMUST00000129559	Ensembl | MGI Sequence Detail	573	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;