Gm15716 Gene Detail

Summary

• Symbol
  Gm15716
• Name
  predicted gene 15716

• Feature Type
  lncRNA gene
• IDs
  MGI:3783158
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:69497406-69516074 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 33.88 cM

Strain
Comparison

• SNPs within 2kb
  654 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783158	lncRNA gene	Chr8:69497406-69516074 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004567	antisense lncRNA gene	Chr8:69189420-69204789 (+)
A/J	MGP_AJ_G0004547	antisense lncRNA gene	Chr8:66393832-66415763 (+)
AKR/J	MGP_AKRJ_G0004531	antisense lncRNA gene	Chr8:68217362-68241658 (+)
BALB/cJ	MGP_BALBcJ_G0004532	antisense lncRNA gene	Chr8:66610442-66630544 (+)
C3H/HeJ	MGP_C3HHeJ_G0004481	antisense lncRNA gene	Chr8:68938719-68957029 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004682	antisense lncRNA gene	Chr8:71798878-71819487 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0004475	antisense lncRNA gene	Chr8:74480737-74497950 (+)
DBA/2J	MGP_DBA2J_G0004491	antisense lncRNA gene	Chr8:66110541-66128657 (+)
FVB/NJ	MGP_FVBNJ_G0004507	antisense lncRNA gene	Chr8:65265278-65280349 (+)
LP/J	MGP_LPJ_G0004571	antisense lncRNA gene	Chr8:69298602-69343117 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004496	antisense lncRNA gene	Chr8:77140094-77161664 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004681	antisense lncRNA gene	Chr8:68484578-68502313 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0004480	antisense lncRNA gene	Chr8:68863344-68880377 (+)

Homology

• Gene Tree
  Gm15716
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15716
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00000089995 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089995	Ensembl Gene Model | MGI Sequence Detail	18669	C57BL/6J
transcript	ENSMUST00000162457	Ensembl | MGI Sequence Detail	404	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;