Gm15733 Pseudogene Detail

Summary

• Symbol
  Gm15733
• Name
  predicted gene 15733

• Feature Type
  pseudogene
• IDs
  MGI:3783175
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:9403759-9404000 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 3.69 cM

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783175	pseudogene	Chr5:9403759-9404000 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012964	pseudogene	Chr5:6380882-6381123 (+)
A/J	MGP_AJ_G0012951	pseudogene	Chr5:6195721-6195962 (+)
AKR/J	MGP_AKRJ_G0012918	pseudogene	Chr5:6302816-6303057 (+)
BALB/cJ	MGP_BALBcJ_G0012930	pseudogene	Chr5:6383296-6383537 (+)
C3H/HeJ	MGP_C3HHeJ_G0012781	pseudogene	Chr5:6518843-6519084 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013290	pseudogene	Chr5:6966461-6966702 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011498	pseudogene	Chr5:5894759-5895001 (+)
CAST/EiJ	MGP_CASTEiJ_G0012519	pseudogene	Chr5:6348319-6348560 (+)
CBA/J	MGP_CBAJ_G0012752	pseudogene	Chr5:7061962-7062203 (+)
DBA/2J	MGP_DBA2J_G0012826	pseudogene	Chr5:6300780-6301021 (+)
FVB/NJ	MGP_FVBNJ_G0012829	pseudogene	Chr5:6060747-6060988 (+)
LP/J	MGP_LPJ_G0012897	pseudogene	Chr5:6523031-6523272 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012842	pseudogene	Chr5:7049983-7050224 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013289	pseudogene	Chr5:6313696-6313937 (+)
PWK/PhJ	MGP_PWKPhJ_G0012336	pseudogene	Chr5:6067759-6068000 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012149	pseudogene	Chr5:6481753-6481995 (+)
WSB/EiJ	MGP_WSBEiJ_G0012553	pseudogene	Chr5:6328126-6328367 (+)

Homology

• Gene Tree
  Gm15733
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086115 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086115	Ensembl Gene Model | MGI Sequence Detail	242	C57BL/6J
transcript	ENSMUST00000132957	Ensembl | MGI Sequence Detail	242	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;