Rps29-ps Pseudogene Detail

Summary

• Symbol
  Rps29-ps
• Name
  ribosomal protein S29, pseudogene
• Synonyms
  Gm15757

• Feature Type
  pseudogene
• IDs
  MGI:3783200
  NCBI Gene: 115490160
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:135035431-135035602 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 74.94 cM

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783200	pseudogene	Chr5:135035419-135035666 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013273	pseudogene	Chr5:139483613-139483784 (+)
A/J	MGP_AJ_G0013254	pseudogene	Chr5:133529843-133530014 (+)
AKR/J	MGP_AKRJ_G0013220	pseudogene	Chr5:137870596-137870767 (+)
BALB/cJ	MGP_BALBcJ_G0013234	pseudogene	Chr5:134885575-134885746 (+)
C3H/HeJ	MGP_C3HHeJ_G0013083	pseudogene	Chr5:138431779-138431950 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013601	pseudogene	Chr5:144720379-144720550 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012806	pseudogene	Chr5:137858673-137858844 (+)
CBA/J	MGP_CBAJ_G0013051	pseudogene	Chr5:150369540-150369711 (+)
DBA/2J	MGP_DBA2J_G0013134	pseudogene	Chr5:133426946-133427117 (+)
FVB/NJ	MGP_FVBNJ_G0013133	pseudogene	Chr5:132565177-132565348 (+)
LP/J	MGP_LPJ_G0013204	pseudogene	Chr5:139944335-139944506 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013151	pseudogene	Chr5:153389455-153389626 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013603	pseudogene	Chr5:137616326-137616497 (+)
PWK/PhJ	MGP_PWKPhJ_G0012620	pseudogene	Chr5:132475349-132475520 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012687	pseudogene	Chr6:91610677-91610835 (-)
WSB/EiJ	MGP_WSBEiJ_G0012844	pseudogene	Chr5:138367628-138367799 (+)

Homology

• Gene Tree
  Rps29-ps
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Rps29-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084392 (Evidence)
• NCBI Gene
  115490160

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084392	Ensembl Gene Model | MGI Sequence Detail	172	C57BL/6J
transcript	ENSMUST00000122083	Ensembl | MGI Sequence Detail	172	Not Applicable

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:182796 Li HH, et al., Induced chromosome deletions cause hypersociability and other features of Williams-Beuren syndrome in mice. EMBO Mol Med. 2009 Apr;1(1):50-65
• Latest
  J:334324 Davenport CM, et al., Innate frequency-discrimination hyperacuity in Williams-Beuren syndrome mice. Cell. 2022 Oct 13;185(21):3877-3895.e21