Gm15777 Gene Detail

Summary

• Symbol
  Gm15777
• Name
  predicted gene 15777

• Feature Type
  lncRNA gene
• IDs
  MGI:3783219
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:100818725-100825971 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 48.51 cM

Strain
Comparison

• SNPs within 2kb
  325 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783219	lncRNA gene	Chr5:100818725-100825971 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004123	antisense lncRNA gene	Chr5:102176615-102183396 (+)
A/J	MGP_AJ_G0004104	antisense lncRNA gene	Chr5:98368060-98376308 (+)
AKR/J	MGP_AKRJ_G0004083	antisense lncRNA gene	Chr5:101608136-101616565 (+)
BALB/cJ	MGP_BALBcJ_G0004090	antisense lncRNA gene	Chr5:99399880-99406613 (+)
C3H/HeJ	MGP_C3HHeJ_G0004037	antisense lncRNA gene	Chr5:101960006-101967293 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004238	antisense lncRNA gene	Chr5:106423917-106430549 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003715	antisense lncRNA gene	Chr5:93613119-93619738 (+)
CAST/EiJ	MGP_CASTEiJ_G0004000	antisense lncRNA gene	Chr5:100617432-100624376 (+)
CBA/J	MGP_CBAJ_G0004031	antisense lncRNA gene	Chr5:110115528-110124784 (+)
DBA/2J	MGP_DBA2J_G0004046	antisense lncRNA gene	Chr5:98561837-98569587 (+)
FVB/NJ	MGP_FVBNJ_G0004064	antisense lncRNA gene	Chr5:97362254-97369168 (+)
LP/J	MGP_LPJ_G0004125	antisense lncRNA gene	Chr5:102790394-102798253 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004053	antisense lncRNA gene	Chr5:115182649-115189529 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004234	antisense lncRNA gene	Chr5:101090454-101097479 (+)
PWK/PhJ	MGP_PWKPhJ_G0003953	antisense lncRNA gene	Chr5:96996348-97003620 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003897	antisense lncRNA gene	Chr5:98763351-98770302 (+)
WSB/EiJ	MGP_WSBEiJ_G0004035	antisense lncRNA gene	Chr5:101425325-101434064 (+)

Homology

• Gene Tree
  Gm15777
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm15777
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085269 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085269	Ensembl Gene Model | MGI Sequence Detail	7247	C57BL/6J
transcript	ENSMUST00000123463	Ensembl | MGI Sequence Detail	876	Not Applicable

References

• Summaries
  All 12

  Phenotypes 8
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14