Mir1188 Gene Detail

Summary

• Symbol
  Mir1188
• Name
  microRNA 1188
• Synonyms
  Mirn1188, mmu-mir-1188

• Feature Type
  miRNA gene
• IDs
  MGI:3783362
  NCBI Gene: 100316669
• Member of
  Mirc43 cluster
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:109578256-109578375 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 60.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783362	miRNA gene	Chr12:109578256-109578375 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007975	miRNA gene	Chr12:111841813-111841932 (+)
A/J	MGP_AJ_G0007969	miRNA gene	Chr12:107534679-107534798 (+)
AKR/J	MGP_AKRJ_G0007946	miRNA gene	Chr12:110671930-110672049 (+)
BALB/cJ	MGP_BALBcJ_G0007948	miRNA gene	Chr12:108008128-108008247 (+)
C3H/HeJ	MGP_C3HHeJ_G0007894	miRNA gene	Chr12:111114317-111114436 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008129	miRNA gene	Chr12:115260079-115260198 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007256	miRNA gene	Chr12:104061613-104061732 (+)
CAST/EiJ	MGP_CASTEiJ_G0007782	miRNA gene	Chr12:106064617-106064736 (+)
CBA/J	MGP_CBAJ_G0007864	miRNA gene	Chr12:119799162-119799281 (+)
DBA/2J	MGP_DBA2J_G0007899	miRNA gene	Chr12:107089697-107089816 (+)
FVB/NJ	MGP_FVBNJ_G0007918	miRNA gene	Chr12:105880411-105880530 (+)
LP/J	MGP_LPJ_G0007980	miRNA gene	Chr12:111670432-111670551 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007889	miRNA gene	Chr12:122956538-122956657 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008124	miRNA gene	Chr12:110153519-110153638 (+)
PWK/PhJ	MGP_PWKPhJ_G0007704	miRNA gene	Chr12:101698524-101698643 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007601	miRNA gene	Chr12:104323440-104323559 (+)
WSB/EiJ	MGP_WSBEiJ_G0007851	miRNA gene	Chr12:111067588-111067707 (+)

Homology

• Gene Tree
  Mir1188
  

Expression

• Assay Results
  710
• Tissues
  1
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000080406 (Evidence)
• NCBI Gene
  100316669

Representative Sequences			Length	Strain/Species
genomic	100316669	NCBI Gene Model | MGI Sequence Detail	120	C57BL/6J
transcript	NR_035419	RefSeq | MGI Sequence Detail	120	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  Primer pair 1

Other Database
Links

miRBase

MI0006290

References

• Summaries
  All 6

  Developmental Gene Expression 1
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:344890 Zhang L, et al., Meg8-DMR as the Secondary Regulatory Region Regulates the Expression of MicroRNAs While It Does Not Affect Embryonic Development in Mice. Genes (Basel). 2023 Jun 14;14(6)