Mir669e Gene Detail

Summary

• Symbol
  Mir669e
• Name
  microRNA 669e
• Synonyms
  Mirn669e, mmu-mir-669e

• Feature Type
  miRNA gene
• IDs
  MGI:3783383
  NCBI Gene: 100316806
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:10472306-10472424 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 8.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783383	miRNA gene	Chr2:10472306-10472424 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008470	miRNA gene	Chr2:7823833-7823951 (+)
A/J	MGP_AJ_G0008457	miRNA gene	Chr2:7490756-7490874 (+)
AKR/J	MGP_AKRJ_G0008442	miRNA gene	Chr2:7732955-7733073 (+)
BALB/cJ	MGP_BALBcJ_G0008445	miRNA gene	Chr2:7490914-7491032 (+)
C3H/HeJ	MGP_C3HHeJ_G0008387	miRNA gene	Chr2:7690763-7690881 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008647	miRNA gene	Chr2:8034844-8034962 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007664	miRNA gene	Chr2:7002145-7002266 (+)
CAST/EiJ	MGP_CASTEiJ_G0008244	miRNA gene	Chr2:7720651-7720767 (+)
CBA/J	MGP_CBAJ_G0008353	miRNA gene	Chr2:8370862-8370980 (+)
DBA/2J	MGP_DBA2J_G0008388	miRNA gene	Chr2:7419705-7419823 (+)
FVB/NJ	MGP_FVBNJ_G0008409	miRNA gene	Chr2:7367376-7367494 (+)
LP/J	MGP_LPJ_G0008473	miRNA gene	Chr2:7726033-7726151 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008372	miRNA gene	Chr2:8306757-8306875 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008637	miRNA gene	Chr2:7686476-7686594 (+)
PWK/PhJ	MGP_PWKPhJ_G0008168	miRNA gene	Chr2:7413470-7413588 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008041	miRNA gene	Chr2:7689284-7689401 (+)
WSB/EiJ	MGP_WSBEiJ_G0008328	miRNA gene	Chr2:7776650-7776768 (+)

Homology

• Gene Tree
  Mir669e
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Mir669e
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080653 (Evidence)
• NCBI Gene
  100316806

Representative Sequences			Length	Strain/Species
genomic	100316806	NCBI Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	NR_035426	RefSeq | MGI Sequence Detail	119	ZRU/MplStud

Other Database
Links

miRBase

MI0006300

References

• Summaries
  All 10

  Developmental Gene Expression 1

  Phenotypes 4
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:338340 Wickramage I, et al., SINE RNA of the imprinted miRNA clusters mediates constitutive type III interferon expression and antiviral protection in hemochorial placentas. Cell Host Microbe. 2023 Jul 12;31(7):1185-1199.e10