Gm10112 Pseudogene Detail

Summary

• Symbol
  Gm10112
• Name
  predicted pseudogene 10112

• Feature Type
  pseudogene
• IDs
  MGI:3800293
  NCBI Gene: 100042872
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:110209664-110210012 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 48.20 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3800293	pseudogene	ChrX:110209567-110210209 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036026	protein coding gene	ChrX:108005847-108006200 (+)
A/J	MGP_AJ_G0036006	protein coding gene	ChrX:107918481-107918834 (+)
AKR/J	MGP_AKRJ_G0035925	protein coding gene	ChrX:111242373-111242726 (+)
BALB/cJ	MGP_BALBcJ_G0035997	protein coding gene	ChrX:106533275-106533628 (+)
C3H/HeJ	MGP_C3HHeJ_G0035703	protein coding gene	ChrX:108476324-108476677 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0036522	protein coding gene	ChrX:111148827-111149180 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019271	protein coding gene	Chr14:46231399-46239081 (-)
CAST/EiJ	MGP_CASTEiJ_G0034989	protein coding gene	ChrX:92404545-92404898 (+)
CBA/J	MGP_CBAJ_G0035679	protein coding gene	ChrX:114656951-114657304 (+)
DBA/2J	MGP_DBA2J_G0035832	protein coding gene	ChrX:107047827-107048180 (+)
FVB/NJ	MGP_FVBNJ_G0035773	protein coding gene	ChrX:106435907-106436260 (+)
LP/J	MGP_LPJ_G0035925	protein coding gene	ChrX:108919710-108920063 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0035804	protein coding gene	ChrX:119944167-119944520 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0036549	protein coding gene	ChrX:107564642-107564995 (+)
PWK/PhJ	MGP_PWKPhJ_G0020333	protein coding gene	Chr14:44095415-44095771 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0034514	protein coding gene	ChrX:93248446-93249033 (+)
WSB/EiJ	MGP_WSBEiJ_G0035127	protein coding gene	ChrX:106255647-106256000 (+)

Homology

• Gene Tree
  Gm10112
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000062226 (Evidence)
• NCBI Gene
  100042872

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000062226	Ensembl Gene Model | MGI Sequence Detail	349	C57BL/6J
transcript	ENSMUST00000075226	Ensembl | MGI Sequence Detail	349	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;