Gm16131 Gene Detail

Summary

• Symbol
  Gm16131
• Name
  predicted gene 16131

• Feature Type
  lncRNA gene
• IDs
  MGI:3801717
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:58025098-58026272 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 31.63 cM

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801717	lncRNA gene	Chr9:58025098-58026272 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004635	antisense lncRNA gene	Chr9:57384198-57385372 (+)
A/J	MGP_AJ_G0004616	antisense lncRNA gene	Chr9:55524320-55525494 (+)
AKR/J	MGP_AKRJ_G0004599	antisense lncRNA gene	Chr9:56817006-56818180 (+)
BALB/cJ	MGP_BALBcJ_G0004600	antisense lncRNA gene	Chr9:55298321-55299495 (+)
C3H/HeJ	MGP_C3HHeJ_G0004549	antisense lncRNA gene	Chr9:57288825-57289999 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004750	antisense lncRNA gene	Chr9:58968877-58970051 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004201	antisense lncRNA gene	Chr9:54810326-54811499 (+)
CAST/EiJ	MGP_CASTEiJ_G0004507	antisense lncRNA gene	Chr9:57383438-57384612 (+)
CBA/J	MGP_CBAJ_G0004543	antisense lncRNA gene	Chr9:61040855-61042029 (+)
DBA/2J	MGP_DBA2J_G0004558	antisense lncRNA gene	Chr9:55381249-55382423 (+)
FVB/NJ	MGP_FVBNJ_G0004576	antisense lncRNA gene	Chr9:54616264-54617438 (+)
LP/J	MGP_LPJ_G0004639	antisense lncRNA gene	Chr9:57670642-57671816 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004564	antisense lncRNA gene	Chr9:62514322-62515496 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004749	antisense lncRNA gene	Chr9:56828648-56829822 (+)
PWK/PhJ	MGP_PWKPhJ_G0004460	antisense lncRNA gene	Chr9:55423354-55424527 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004400	antisense lncRNA gene	Chr9:57100139-57101312 (+)
WSB/EiJ	MGP_WSBEiJ_G0004548	antisense lncRNA gene	Chr9:56765164-56766338 (+)

Homology

• Gene Tree
  Gm16131
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085753 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085753	Ensembl Gene Model | MGI Sequence Detail	1175	C57BL/6J
transcript	ENSMUST00000131007	Ensembl | MGI Sequence Detail	659	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;