Gm16214 Gene Detail

Summary

• Symbol
  Gm16214
• Name
  predicted gene 16214

• Feature Type
  lncRNA gene
• IDs
  MGI:3801724
  NCBI Gene: 102640140
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:41933911-41945409 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 23.56 cM

Strain
Comparison

• SNPs within 2kb
  491 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801724	lncRNA gene	Chr9:41933911-41950252 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004619	antisense lncRNA gene	Chr9:40347882-40360512 (+)
A/J	MGP_AJ_G0004599	antisense lncRNA gene	Chr9:39279633-39290995 (+)
AKR/J	MGP_AKRJ_G0004583	antisense lncRNA gene	Chr9:40037757-40051473 (+)
BALB/cJ	MGP_BALBcJ_G0004584	antisense lncRNA gene	Chr9:39010954-39022307 (+)
C3H/HeJ	MGP_C3HHeJ_G0004533	antisense lncRNA gene	Chr9:40541440-40554055 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004733	antisense lncRNA gene	Chr9:41611476-41624624 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004184	antisense lncRNA gene	Chr9:38889595-38898056 (+)
CAST/EiJ	MGP_CASTEiJ_G0004491	antisense lncRNA gene	Chr9:40326280-40339345 (+)
CBA/J	MGP_CBAJ_G0004527	antisense lncRNA gene	Chr9:43085255-43099726 (+)
DBA/2J	MGP_DBA2J_G0004542	antisense lncRNA gene	Chr9:39202167-39213512 (+)
FVB/NJ	MGP_FVBNJ_G0004559	antisense lncRNA gene	Chr9:38430351-38441699 (+)
LP/J	MGP_LPJ_G0004623	antisense lncRNA gene	Chr9:40621167-40632510 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004548	antisense lncRNA gene	Chr9:45069445-45080788 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004733	antisense lncRNA gene	Chr9:39951225-39962569 (+)
PWK/PhJ	MGP_PWKPhJ_G0004444	antisense lncRNA gene	Chr9:39025054-39036551 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004384	antisense lncRNA gene	Chr9:40202910-40214095 (+)
WSB/EiJ	MGP_WSBEiJ_G0004532	antisense lncRNA gene	Chr9:39988316-40000512 (+)

Homology

• Gene Tree
  Gm16214
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000086360 (Evidence)
• NCBI Gene
  102640140

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086360	Ensembl Gene Model | MGI Sequence Detail	11499	C57BL/6J
transcript	ENSMUST00000143710	Ensembl | MGI Sequence Detail	1388	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 9
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;