About   Help   FAQ
Gm15949 Gene Detail
Summary
  • Symbol
    Gm15949
  • Name
    predicted gene 15949
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3801730
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:67142434-67142984 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 35.95 cM
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801730
 lncRNA gene Chr5:67142434-67142984 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004090
 antisense lncRNA gene Chr5:66749756-66750306 (-)
A/J MGP_AJ_G0004071
 antisense lncRNA gene Chr5:64247297-64247847 (-)
AKR/J MGP_AKRJ_G0004049
 antisense lncRNA gene Chr5:66295766-66296316 (-)
BALB/cJ MGP_BALBcJ_G0004057
 antisense lncRNA gene Chr5:64935338-64935888 (-)
C3H/HeJ MGP_C3HHeJ_G0004003
 antisense lncRNA gene Chr5:66626599-66627149 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004205
 antisense lncRNA gene Chr5:69513652-69514202 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003682
 antisense lncRNA gene Chr5:60309930-60310481 (-)
CAST/EiJ MGP_CASTEiJ_G0003966
 antisense lncRNA gene Chr5:65801943-65802493 (-)
CBA/J MGP_CBAJ_G0003997
 antisense lncRNA gene Chr5:71742761-71743311 (-)
DBA/2J MGP_DBA2J_G0004012
 antisense lncRNA gene Chr5:64268530-64269080 (-)
FVB/NJ MGP_FVBNJ_G0004031
 antisense lncRNA gene Chr5:63448133-63448683 (-)
LP/J MGP_LPJ_G0004092
 antisense lncRNA gene Chr5:67247479-67248029 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004020
 antisense lncRNA gene Chr5:74530881-74531431 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004201
 antisense lncRNA gene Chr5:65973771-65974321 (-)
PWK/PhJ MGP_PWKPhJ_G0003919
 antisense lncRNA gene Chr5:63295609-63296159 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003864
 antisense lncRNA gene Chr5:65324155-65324705 (-)
WSB/EiJ MGP_WSBEiJ_G0004001
 antisense lncRNA gene Chr5:66206889-66207439 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Gm15949
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085839 Ensembl Gene Model | MGI Sequence Detail 551 C57BL/6J ±  kb
transcript ENSMUST00000129485 Ensembl | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 21
    Phenotypes 17
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory