Gm15886 MGI Mouse Gene Detail - MGI:3801744

Sequence Map

Chr3:103679189-103684541 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801744	lncRNA gene	Chr3:103679189-103696718 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003806	antisense lncRNA gene	Chr3:105060345-105077376 (+)
A/J	MGP_AJ_G0003786	antisense lncRNA gene	Chr3:101714984-101732759 (+)
AKR/J	MGP_AKRJ_G0003762	antisense lncRNA gene	Chr3:104197554-104214625 (+)
BALB/cJ	MGP_BALBcJ_G0003773	antisense lncRNA gene	Chr3:101484262-101502838 (+)
C3H/HeJ	MGP_C3HHeJ_G0003720	antisense lncRNA gene	Chr3:104566800-104584338 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003915	antisense lncRNA gene	Chr3:108954948-108972391 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003418	antisense lncRNA gene	Chr3:97841670-97859222 (+)
CAST/EiJ	MGP_CASTEiJ_G0003684	antisense lncRNA gene	Chr3:103680485-103698741 (+)
CBA/J	MGP_CBAJ_G0003715	antisense lncRNA gene	Chr3:112701682-112718750 (+)
DBA/2J	MGP_DBA2J_G0003726	antisense lncRNA gene	Chr3:100960786-100977924 (+)
FVB/NJ	MGP_FVBNJ_G0003747	antisense lncRNA gene	Chr3:98888583-98905940 (+)
LP/J	MGP_LPJ_G0003808	antisense lncRNA gene	Chr3:106399899-106417622 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003734	antisense lncRNA gene	Chr3:118807588-118825458 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003916	antisense lncRNA gene	Chr3:103754022-103772431 (+)
PWK/PhJ	MGP_PWKPhJ_G0003640	antisense lncRNA gene	Chr3:100732210-100749420 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003584	antisense lncRNA gene	Chr3:101817726-101834622 (+)
WSB/EiJ	MGP_WSBEiJ_G0003720	antisense lncRNA gene	Chr3:104302709-104319898 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	102637354	NCBI Gene Model \| MGI Sequence Detail	5353	C57BL/6J	± kb
	transcript	AK016162	GenBank \| ENA \| DDBJ \| MGI Sequence Detail	1251	C57BL/6J

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Summaries

All 13

Phenotypes 4
Earliest

J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm15886:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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