Gm15968 Pseudogene Detail

Summary

• Symbol
  Gm15968
• Name
  predicted gene 15968

• Feature Type
  pseudogene
• IDs
  MGI:3801809
  NCBI Gene: 100416946
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:7681311-7682478 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 5.34 cM

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801809	pseudogene	Chr19:7681068-7682557 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011467	pseudogene	Chr19:4856313-4857480 (-)
A/J	MGP_AJ_G0011470	pseudogene	Chr19:4510825-4511992 (-)
AKR/J	MGP_AKRJ_G0011432	pseudogene	Chr19:4622627-4623794 (-)
BALB/cJ	MGP_BALBcJ_G0011449	pseudogene	Chr19:4589606-4590773 (-)
C3H/HeJ	MGP_C3HHeJ_G0011333	pseudogene	Chr19:4754589-4755756 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011736	pseudogene	Chr19:4958978-4960145 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011132	pseudogene	Chr19:4670569-4672026 (-)
CBA/J	MGP_CBAJ_G0011306	pseudogene	Chr19:5029110-5030277 (-)
DBA/2J	MGP_DBA2J_G0011360	pseudogene	Chr19:4441670-4442837 (-)
FVB/NJ	MGP_FVBNJ_G0011365	pseudogene	Chr19:4484363-4485530 (-)
LP/J	MGP_LPJ_G0011430	pseudogene	Chr19:4710344-4711511 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011362	pseudogene	Chr19:4931622-4932789 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011722	pseudogene	Chr19:4786829-4787996 (-)
PWK/PhJ	MGP_PWKPhJ_G0012486	pseudogene	Chr5:62277791-62279025 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010819	pseudogene	Chr19:4577887-4579057 (-)
WSB/EiJ	MGP_WSBEiJ_G0011164	pseudogene	Chr19:4680961-4682128 (-)

Homology

• Gene Tree
  Gm15968
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081596 (Evidence)
• NCBI Gene
  100416946

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081596	Ensembl Gene Model | MGI Sequence Detail	1168	C57BL/6J
transcript	ENSMUST00000119342	Ensembl | MGI Sequence Detail	1168	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;