Gm15659 Pseudogene Detail

Summary

• Symbol
  Gm15659
• Name
  predicted gene 15659

• Feature Type
  pseudogene
• IDs
  MGI:3801822
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:66072244-66072584 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 33.38 cM

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801822	pseudogene	Chr1:66072244-66072584 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010188	pseudogene	Chr1:66282973-66283310 (+)
A/J	MGP_AJ_G0010181	pseudogene	Chr1:63959570-63959907 (+)
AKR/J	MGP_AKRJ_G0010155	pseudogene	Chr1:65743768-65744105 (+)
BALB/cJ	MGP_BALBcJ_G0010160	pseudogene	Chr1:64013400-64013737 (+)
C3H/HeJ	MGP_C3HHeJ_G0010097	pseudogene	Chr1:66017495-66017832 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010414	pseudogene	Chr1:68828929-68829269 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009154	pseudogene	Chr1:59911168-59911505 (+)
CAST/EiJ	MGP_CASTEiJ_G0009927	pseudogene	Chr1:65256746-65257083 (+)
CBA/J	MGP_CBAJ_G0010065	pseudogene	Chr1:71057306-71057643 (+)
DBA/2J	MGP_DBA2J_G0010092	pseudogene	Chr1:63332954-63333291 (+)
FVB/NJ	MGP_FVBNJ_G0010114	pseudogene	Chr1:62601124-62601461 (+)
LP/J	MGP_LPJ_G0010177	pseudogene	Chr1:67210526-67210863 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010074	pseudogene	Chr1:74019979-74020316 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010392	pseudogene	Chr1:65713507-65713847 (+)
PWK/PhJ	MGP_PWKPhJ_G0009829	pseudogene	Chr1:62720704-62721041 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009642	pseudogene	Chr1:65169918-65170255 (+)
WSB/EiJ	MGP_WSBEiJ_G0009991	pseudogene	Chr1:65455065-65455402 (+)

Homology

• Gene Tree
  Gm15659
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15659
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083242 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083242	Ensembl Gene Model | MGI Sequence Detail	341	C57BL/6J
transcript	ENSMUST00000118881	Ensembl | MGI Sequence Detail	341	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm15659:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7129	Chr1:66072156-66072171 (+)	-80 bp