Gm15958 Gene Detail

Summary

• Symbol
  Gm15958
• Name
  predicted gene 15958

• Feature Type
  lncRNA gene
• IDs
  MGI:3801839
  NCBI Gene: 100503546
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:66424345-66452716 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 39.36 cM

Strain
Comparison

• SNPs within 2kb
  879 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801839	lncRNA gene	Chr18:66424345-66452716 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015368	unclassified non-coding RNA gene	Chr18:66499694-66531495 (+)
A/J	MGP_AJ_G0015342	unclassified non-coding RNA gene	Chr18:63600296-63628591 (+)
AKR/J	MGP_AKRJ_G0015306	unclassified non-coding RNA gene	Chr18:65405034-65436190 (+)
BALB/cJ	MGP_BALBcJ_G0015306	unclassified non-coding RNA gene	Chr18:63743144-63773162 (+)
C3H/HeJ	MGP_C3HHeJ_G0015130	unclassified non-coding RNA gene	Chr18:65615619-65645945 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015760	unclassified non-coding RNA gene	Chr18:68261669-68293250 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013501	unclassified non-coding RNA gene	Chr18:63033716-63060788 (+)
CAST/EiJ	MGP_CASTEiJ_G0014681	unclassified non-coding RNA gene	Chr18:65622529-65650770 (+)
CBA/J	MGP_CBAJ_G0015109	unclassified non-coding RNA gene	Chr18:70547857-70585449 (+)
DBA/2J	MGP_DBA2J_G0015204	unclassified non-coding RNA gene	Chr18:63264148-63294179 (+)
FVB/NJ	MGP_FVBNJ_G0015211	unclassified non-coding RNA gene	Chr18:62635838-62665741 (+)
LP/J	MGP_LPJ_G0015284	unclassified non-coding RNA gene	Chr18:66350345-66380204 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015237	unclassified non-coding RNA gene	Chr18:71900402-71930734 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015799	unclassified non-coding RNA gene	Chr18:65619983-65651559 (+)
PWK/PhJ	MGP_PWKPhJ_G0014471	unclassified non-coding RNA gene	Chr18:63529483-63558422 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014258	unclassified non-coding RNA gene	Chr18:65783913-65813447 (+)
WSB/EiJ	MGP_WSBEiJ_G0014788	unclassified non-coding RNA gene	Chr18:65479142-65507389 (+)

Homology

• Gene Tree
  Gm15958
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000085055 (Evidence)
• NCBI Gene
  100503546

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085055	Ensembl Gene Model | MGI Sequence Detail	28372	C57BL/6J
transcript	ENSMUST00000153479	Ensembl | MGI Sequence Detail	2087	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 9
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;