Gm16222 Gene Detail

Summary

• Symbol
  Gm16222
• Name
  predicted gene 16222

• Feature Type
  lncRNA gene
• IDs
  MGI:3801901
  NCBI Gene: 102639053
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:75914451-75916336 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 38.69 cM

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801901	lncRNA gene	Chr10:75914451-75916336 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002868	antisense lncRNA gene	Chr10:76293858-76295630 (+)
A/J	MGP_AJ_G0002845	antisense lncRNA gene	Chr10:73667167-73669768 (+)
AKR/J	MGP_AKRJ_G0002825	antisense lncRNA gene	Chr10:75648888-75650592 (+)
BALB/cJ	MGP_BALBcJ_G0002832	antisense lncRNA gene	Chr10:73867298-73869091 (+)
C3H/HeJ	MGP_C3HHeJ_G0002789	antisense lncRNA gene	Chr10:75710542-75713216 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002975	antisense lncRNA gene	Chr10:78992777-78994544 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002518	antisense lncRNA gene	Chr10:70108613-70110310 (+)
CAST/EiJ	MGP_CASTEiJ_G0002761	antisense lncRNA gene	Chr10:76025572-76027315 (+)
CBA/J	MGP_CBAJ_G0002784	antisense lncRNA gene	Chr10:82081856-82083609 (+)
DBA/2J	MGP_DBA2J_G0002791	antisense lncRNA gene	Chr10:72976595-72978331 (+)
FVB/NJ	MGP_FVBNJ_G0002811	antisense lncRNA gene	Chr10:72133981-72135734 (+)
LP/J	MGP_LPJ_G0002867	antisense lncRNA gene	Chr10:76807054-76808749 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002801	antisense lncRNA gene	Chr10:84163612-84165361 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002978	antisense lncRNA gene	Chr10:75694390-75695841 (+)
PWK/PhJ	MGP_PWKPhJ_G0002719	antisense lncRNA gene	Chr10:72803014-72804668 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0002790	antisense lncRNA gene	Chr10:75675701-75678870 (+)

Homology

• Gene Tree
  Gm16222
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm16222
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000086798 (Evidence)
• NCBI Gene
  102639053

Representative Sequences			Length	Strain/Species
genomic	102639053	NCBI Gene Model | MGI Sequence Detail	1886	C57BL/6J
transcript	NR_152793	RefSeq | MGI Sequence Detail	1298	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 6
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87