Gm15859 Gene Detail

Summary

• Symbol
  Gm15859
• Name
  predicted gene 15859

• Feature Type
  lncRNA gene
• IDs
  MGI:3801904
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:4547733-4548673 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 2.46 cM

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801904	lncRNA gene	Chr16:4547733-4548673 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003321	antisense lncRNA gene	Chr16:1241421-1242361 (+)
A/J	MGP_AJ_G0003297	antisense lncRNA gene	Chr16:1056181-1057121 (+)
AKR/J	MGP_AKRJ_G0003280	antisense lncRNA gene	Chr16:1248263-1249203 (+)
BALB/cJ	MGP_BALBcJ_G0003286	antisense lncRNA gene	Chr16:1213068-1214008 (+)
C3H/HeJ	MGP_C3HHeJ_G0003239	antisense lncRNA gene	Chr16:1270163-1271037 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003428	antisense lncRNA gene	Chr16:1325863-1326803 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0003204	antisense lncRNA gene	Chr16:1261669-1262755 (+)
CBA/J	MGP_CBAJ_G0003236	antisense lncRNA gene	Chr16:1389063-1390003 (+)
DBA/2J	MGP_DBA2J_G0003241	antisense lncRNA gene	Chr16:1169378-1170298 (+)
FVB/NJ	MGP_FVBNJ_G0003260	antisense lncRNA gene	Chr16:1154586-1156253 (+)
LP/J	MGP_LPJ_G0003314	antisense lncRNA gene	Chr16:1237353-1238293 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003249	antisense lncRNA gene	Chr16:1251500-1252440 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003430	antisense lncRNA gene	Chr16:1213143-1214083 (+)
PWK/PhJ	MGP_PWKPhJ_G0003163	antisense lncRNA gene	Chr16:1233113-1234175 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003109	antisense lncRNA gene	Chr16:1311505-1312450 (+)
WSB/EiJ	MGP_WSBEiJ_G0003239	antisense lncRNA gene	Chr16:1233610-1234549 (+)

Homology

• Gene Tree
  Gm15859
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000086944 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086944	Ensembl Gene Model | MGI Sequence Detail	941	C57BL/6J
transcript	ENSMUST00000132069	Ensembl | MGI Sequence Detail	710	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;