Gm16128 Pseudogene Detail

Summary

• Symbol
  Gm16128
• Name
  predicted gene 16128

• Feature Type
  pseudogene
• IDs
  MGI:3801948
  NCBI Gene: 100416328
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:62771529-62772102 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 32.50 cM

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801948	pseudogene	Chr10:62771477-62772102 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010526	pseudogene	Chr10:62420014-62420639 (+)
A/J	MGP_AJ_G0010519	pseudogene	Chr10:60487522-60488147 (+)
AKR/J	MGP_AKRJ_G0010479	pseudogene	Chr10:62074308-62074933 (+)
BALB/cJ	MGP_BALBcJ_G0010493	pseudogene	Chr10:60589928-60590553 (+)
C3H/HeJ	MGP_C3HHeJ_G0010417	pseudogene	Chr10:61997919-61998544 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010762	pseudogene	Chr10:64655763-64656388 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010241	pseudogene	Chr10:62046157-62046782 (+)
CBA/J	MGP_CBAJ_G0010386	pseudogene	Chr10:67114295-67114920 (+)
DBA/2J	MGP_DBA2J_G0010419	pseudogene	Chr10:59759485-59760110 (+)
FVB/NJ	MGP_FVBNJ_G0010435	pseudogene	Chr10:59027161-59027786 (+)
LP/J	MGP_LPJ_G0010508	pseudogene	Chr10:62789112-62789737 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010406	pseudogene	Chr10:69277822-69278447 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010734	pseudogene	Chr10:61920717-61921342 (+)
PWK/PhJ	MGP_PWKPhJ_G0010140	pseudogene	Chr10:59637396-59638024 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009953	pseudogene	Chr10:61270355-61270980 (+)
WSB/EiJ	MGP_WSBEiJ_G0010305	pseudogene	Chr10:61867883-61868508 (+)

Homology

• Gene Tree
  Gm16128
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm16128
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000080971 (Evidence)
• NCBI Gene
  100416328

Representative Sequences			Length	Strain/Species
genomic	100416328	NCBI Gene Model | MGI Sequence Detail	574	C57BL/6J

References

• Summaries
  All 11

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87