Gm16159 Gene Detail

Summary

• Symbol
  Gm16159
• Name
  predicted gene 16159

• Feature Type
  lncRNA gene
• IDs
  MGI:3801949
  NCBI Gene: 102633315
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr8:26038689-26046099 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 14.17 cM

Strain
Comparison

• SNPs within 2kb
  305 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801949	lncRNA gene	Chr8:26038677-26046099 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015709	unclassified non-coding RNA gene	Chr8:23595134-23603722 (-)
A/J	MGP_AJ_G0015687	unclassified non-coding RNA gene	Chr8:22748191-22756176 (-)
AKR/J	MGP_AKRJ_G0015650	unclassified non-coding RNA gene	Chr8:23495293-23502719 (-)
BALB/cJ	MGP_BALBcJ_G0015648	unclassified non-coding RNA gene	Chr8:22895972-22903350 (-)
C3H/HeJ	MGP_C3HHeJ_G0015470	unclassified non-coding RNA gene	Chr8:23714271-23722724 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0016103	unclassified non-coding RNA gene	Chr8:24562094-24569511 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013832	unclassified non-coding RNA gene	Chr8:20021283-20028489 (-)
CAST/EiJ	MGP_CASTEiJ_G0015025	unclassified non-coding RNA gene	Chr8:23147917-23156229 (-)
CBA/J	MGP_CBAJ_G0015451	unclassified non-coding RNA gene	Chr8:25515442-25522867 (-)
DBA/2J	MGP_DBA2J_G0015547	unclassified non-coding RNA gene	Chr8:22721167-22728510 (-)
FVB/NJ	MGP_FVBNJ_G0015553	unclassified non-coding RNA gene	Chr8:22527546-22534825 (-)
LP/J	MGP_LPJ_G0015627	unclassified non-coding RNA gene	Chr8:23582714-23591207 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015575	unclassified non-coding RNA gene	Chr8:24977648-24985035 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016145	unclassified non-coding RNA gene	Chr8:23436958-23444324 (-)
PWK/PhJ	MGP_PWKPhJ_G0014807	unclassified non-coding RNA gene	Chr8:22356083-22363549 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014596	unclassified non-coding RNA gene	Chr8:22802140-22809438 (-)
WSB/EiJ	MGP_WSBEiJ_G0015130	unclassified non-coding RNA gene	Chr8:23655424-23662843 (-)

Homology

• Gene Tree
  Gm16159
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  6
• Gene trapped
  6
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000086134 (Evidence)
• NCBI Gene
  102633315

Representative Sequences			Length	Strain/Species
genomic	102633315	NCBI Gene Model | MGI Sequence Detail	7411	C57BL/6J
transcript	NR_110510	RefSeq | MGI Sequence Detail	935	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 10

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm16159:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr80714	Chr8:26046177-26046200 (-)	-90 bp
Tssr80713	Chr8:26046150-26046168 (-)	-60 bp