Gm15824 Pseudogene Detail

Summary

• Symbol
  Gm15824
• Name
  predicted gene 15824

• Feature Type
  pseudogene
• IDs
  MGI:3801976
  NCBI Gene: 100188958
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:64347376-64348330 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 32.80 cM

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801976	pseudogene	Chr5:64345961-64348379 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013117	pseudogene	Chr5:63766348-63767302 (-)
A/J	MGP_AJ_G0013101	pseudogene	Chr5:61389779-61390727 (-)
AKR/J	MGP_AKRJ_G0013067	pseudogene	Chr5:63308216-63309164 (-)
BALB/cJ	MGP_BALBcJ_G0013081	pseudogene	Chr5:62069417-62070365 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0013441	pseudogene	Chr5:66409056-66410010 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011684	pseudogene	Chr5:91275343-91276233 (+)
CAST/EiJ	MGP_CASTEiJ_G0012663	pseudogene	Chr5:62744762-62745704 (-)
CBA/J	MGP_CBAJ_G0012900	pseudogene	Chr5:68535898-68536846 (-)
DBA/2J	MGP_DBA2J_G0012978	pseudogene	Chr5:61419070-61420023 (-)
FVB/NJ	MGP_FVBNJ_G0012982	pseudogene	Chr5:60599139-60600087 (-)
LP/J	MGP_LPJ_G0013052	pseudogene	Chr5:64226342-64227296 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012999	pseudogene	Chr5:71458225-71459173 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013443	pseudogene	Chr5:63005654-63006602 (-)
PWK/PhJ	MGP_PWKPhJ_G0012482	pseudogene	Chr5:60390092-60391018 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012281	pseudogene	Chr5:62356415-62357434 (-)
WSB/EiJ	MGP_WSBEiJ_G0012700	pseudogene	Chr5:63215162-63216124 (-)

Homology

• Gene Tree
  Gm15824
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm15824
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083435 (Evidence)
• NCBI Gene
  100188958

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083435	Ensembl Gene Model | MGI Sequence Detail	955	C57BL/6J
transcript	ENSMUST00000119516	Ensembl | MGI Sequence Detail	955	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17