Gm16082 Pseudogene Detail

Summary

• Symbol
  Gm16082
• Name
  predicted gene 16082

• Feature Type
  pseudogene
• IDs
  MGI:3802036
  NCBI Gene: 108168161
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:49950703-49951079 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 25.79 cM

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802036	pseudogene	Chr14:49950557-49954602 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0011099	pseudogene	Chr14:42253716-42255047 (-)
AKR/J	MGP_AKRJ_G0011057	pseudogene	Chr14:43904719-43905344 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0010974	pseudogene	Chr14:43675737-43676914 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011360	pseudogene	Chr14:45407649-45408025 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009941	pseudogene	Chr14:41526615-41527026 (-)
CAST/EiJ	MGP_CASTEiJ_G0010790	pseudogene	Chr14:40806178-40806554 (-)
CBA/J	MGP_CBAJ_G0010947	pseudogene	Chr14:46801263-46801906 (-)
DBA/2J	MGP_DBA2J_G0010994	pseudogene	Chr14:42135817-42136527 (-)
FVB/NJ	MGP_FVBNJ_G0011001	pseudogene	Chr14:41855511-41859941 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0010989	pseudogene	Chr14:46190848-46191608 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011340	pseudogene	Chr14:43425251-43426935 (-)
PWK/PhJ	MGP_PWKPhJ_G0010660	pseudogene	Chr14:39040292-39041434 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010484	pseudogene	Chr14:39538653-39539067 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm16082
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16082
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000082967 (Evidence)
• NCBI Gene
  108168161

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082967	Ensembl Gene Model | MGI Sequence Detail	377	C57BL/6J
transcript	ENSMUST00000115992	Ensembl | MGI Sequence Detail	377	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;