Gm16152 Gene Detail

Summary

• Symbol
  Gm16152
• Name
  predicted gene 16152

• Feature Type
  lncRNA gene
• IDs
  MGI:3802058
  NCBI Gene: 102638209
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:38424030-38433055 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 16.78 cM

Strain
Comparison

• SNPs within 2kb
  382 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802058	lncRNA gene	Chr1:38424030-38433055 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002668	antisense lncRNA gene	Chr1:37048041-37058676 (+)
A/J	MGP_AJ_G0002644	antisense lncRNA gene	Chr1:36047011-36056109 (+)
AKR/J	MGP_AKRJ_G0002624	antisense lncRNA gene	Chr1:36537602-36546280 (+)
BALB/cJ	MGP_BALBcJ_G0002630	antisense lncRNA gene	Chr1:35693888-35702613 (+)
C3H/HeJ	MGP_C3HHeJ_G0002590	antisense lncRNA gene	Chr1:36767366-36777285 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002774	antisense lncRNA gene	Chr1:38648961-38660799 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002321	antisense lncRNA gene	Chr1:33011696-33020071 (+)
CAST/EiJ	MGP_CASTEiJ_G0002563	antisense lncRNA gene	Chr1:36634706-36644997 (+)
CBA/J	MGP_CBAJ_G0002585	antisense lncRNA gene	Chr1:39721005-39729564 (+)
DBA/2J	MGP_DBA2J_G0002590	antisense lncRNA gene	Chr1:35337355-35346317 (+)
FVB/NJ	MGP_FVBNJ_G0002610	antisense lncRNA gene	Chr1:34863510-34872574 (+)
LP/J	MGP_LPJ_G0002670	antisense lncRNA gene	Chr1:37409496-37419930 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002601	antisense lncRNA gene	Chr1:41864869-41875481 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002779	antisense lncRNA gene	Chr1:36609658-36618272 (+)
PWK/PhJ	MGP_PWKPhJ_G0002520	antisense lncRNA gene	Chr1:35125939-35134277 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002474	antisense lncRNA gene	Chr1:36551947-36560185 (+)
WSB/EiJ	MGP_WSBEiJ_G0002592	antisense lncRNA gene	Chr1:36575991-36587154 (+)

Homology

• Gene Tree
  Gm16152
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16152
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000087131 (Evidence)
• NCBI Gene
  102638209

Representative Sequences			Length	Strain/Species
genomic	102638209	NCBI Gene Model | MGI Sequence Detail	9026	C57BL/6J
transcript	NR_190174	RefSeq | MGI Sequence Detail	1189	C57BL/6
polypeptide	A0A411EDI6	UniProt | EBI | MGI Sequence Detail	151	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 10

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;