Gm16010 MGI Mouse Gene Detail - MGI:3802126

Sequence Map

Chr9:96898019-96904096 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802126	lncRNA gene	Chr9:96896418-96905884 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004666	antisense lncRNA gene	Chr9:98259376-98265449 (+)
A/J	MGP_AJ_G0004647	antisense lncRNA gene	Chr9:94809379-94815452 (+)
AKR/J	MGP_AKRJ_G0004630	antisense lncRNA gene	Chr9:97115795-97121873 (+)
BALB/cJ	MGP_BALBcJ_G0004631	antisense lncRNA gene	Chr9:94487106-94493179 (+)
C3H/HeJ	MGP_C3HHeJ_G0004580	antisense lncRNA gene	Chr9:97523079-97529152 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004781	antisense lncRNA gene	Chr9:101066456-101072533 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004226	antisense lncRNA gene	Chr9:92635682-92642023 (+)
CAST/EiJ	MGP_CASTEiJ_G0004536	antisense lncRNA gene	Chr9:97321235-97327312 (+)
CBA/J	MGP_CBAJ_G0004574	antisense lncRNA gene	Chr9:104566960-104573033 (+)
DBA/2J	MGP_DBA2J_G0004589	antisense lncRNA gene	Chr9:94327892-94333965 (+)
FVB/NJ	MGP_FVBNJ_G0004607	antisense lncRNA gene	Chr9:93176442-93182515 (+)
LP/J	MGP_LPJ_G0004670	antisense lncRNA gene	Chr9:98505132-98511205 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004595	antisense lncRNA gene	Chr9:106545314-106551387 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004780	antisense lncRNA gene	Chr9:97359541-97365620 (+)
PWK/PhJ	MGP_PWKPhJ_G0004490	antisense lncRNA gene	Chr9:94523490-94529569 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004428	antisense lncRNA gene	Chr9:97417594-97423693 (+)
WSB/EiJ	MGP_WSBEiJ_G0004579	antisense lncRNA gene	Chr9:97224996-97231069 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000085541	Ensembl Gene Model \| MGI Sequence Detail	6078	C57BL/6J	± kb
	transcript	ENSMUST00000145410	Ensembl \| MGI Sequence Detail	4427	Not Applicable

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Summaries

All 11

Developmental Gene Expression 1

Phenotypes 2
Earliest

J:263878 Aboudehen K, et al., Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. J Biol Chem. 2018 Jun 15;293(24):9388-9398

TSS for Gm16010:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/19/2024 MGI 6.24