Gm16244 Gene Detail

Summary

• Symbol
  Gm16244
• Name
  predicted gene 16244

• Feature Type
  lncRNA gene
• IDs
  MGI:3802128
  NCBI Gene: 102637720
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:42767471-42769887 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 36.57 cM

Strain
Comparison

• SNPs within 2kb
  256 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802128	lncRNA gene	Chr19:42767471-42769893 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015388	unclassified non-coding RNA gene	Chr19:42134767-42138420 (+)
A/J	MGP_AJ_G0015363	unclassified non-coding RNA gene	Chr19:40108143-40110567 (+)
AKR/J	MGP_AKRJ_G0015327	unclassified non-coding RNA gene	Chr19:41405058-41408929 (+)
BALB/cJ	MGP_BALBcJ_G0015327	unclassified non-coding RNA gene	Chr19:40176932-40179664 (+)
C3H/HeJ	MGP_C3HHeJ_G0015151	unclassified non-coding RNA gene	Chr19:41564142-41567651 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015781	unclassified non-coding RNA gene	Chr19:43208279-43210611 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013522	unclassified non-coding RNA gene	Chr19:39457737-39461423 (+)
CAST/EiJ	MGP_CASTEiJ_G0014702	unclassified non-coding RNA gene	Chr19:41263592-41267526 (+)
CBA/J	MGP_CBAJ_G0015130	unclassified non-coding RNA gene	Chr19:45307355-45313910 (+)
DBA/2J	MGP_DBA2J_G0015225	unclassified non-coding RNA gene	Chr19:39948200-39950624 (+)
FVB/NJ	MGP_FVBNJ_G0015232	unclassified non-coding RNA gene	Chr19:39727577-39728557 (+)
LP/J	MGP_LPJ_G0015305	unclassified non-coding RNA gene	Chr19:42115486-42119285 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015258	unclassified non-coding RNA gene	Chr19:44898720-44901126 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015820	unclassified non-coding RNA gene	Chr19:41477646-41481486 (+)
PWK/PhJ	MGP_PWKPhJ_G0014492	unclassified non-coding RNA gene	Chr19:39851436-39854260 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014279	unclassified non-coding RNA gene	Chr19:40220442-40224475 (+)
WSB/EiJ	MGP_WSBEiJ_G0014809	unclassified non-coding RNA gene	Chr19:41615845-41618258 (+)

Homology

• Gene Tree
  Gm16244
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000090235 (Evidence)
• NCBI Gene
  102637720

Representative Sequences			Length	Strain/Species
genomic	102637720	NCBI Gene Model | MGI Sequence Detail	2417	C57BL/6J
transcript	AK049068	GenBank | ENA | DDBJ | MGI Sequence Detail	2329	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;