Gm16221 Pseudogene Detail

Summary

• Symbol
  Gm16221
• Name
  predicted gene 16221

• Feature Type
  pseudogene
• IDs
  MGI:3802147
  NCBI Gene: 102638935
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:75781129-75781521 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 38.63 cM

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802147	pseudogene	Chr10:75781002-75782311 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010533	pseudogene	Chr10:76147417-76147809 (-)
A/J	MGP_AJ_G0010526	pseudogene	Chr10:73529765-73530157 (-)
AKR/J	MGP_AKRJ_G0010486	pseudogene	Chr10:75505047-75505439 (-)
BALB/cJ	MGP_BALBcJ_G0010500	pseudogene	Chr10:73726265-73726657 (-)
C3H/HeJ	MGP_C3HHeJ_G0010424	pseudogene	Chr10:75551839-75552231 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010768	pseudogene	Chr10:78839927-78840319 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009435	pseudogene	Chr10:69979743-69980138 (-)
CAST/EiJ	MGP_CASTEiJ_G0010248	pseudogene	Chr10:75868436-75868828 (-)
CBA/J	MGP_CBAJ_G0010393	pseudogene	Chr10:81911201-81911593 (-)
DBA/2J	MGP_DBA2J_G0010426	pseudogene	Chr10:72828537-72828929 (-)
FVB/NJ	MGP_FVBNJ_G0010442	pseudogene	Chr10:71995070-71995462 (-)
LP/J	MGP_LPJ_G0010515	pseudogene	Chr10:76648454-76648846 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010414	pseudogene	Chr10:84004477-84004869 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010741	pseudogene	Chr10:75538375-75538767 (-)
PWK/PhJ	MGP_PWKPhJ_G0010147	pseudogene	Chr10:72657398-72657790 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009960	pseudogene	Chr10:74791382-74791776 (-)
WSB/EiJ	MGP_WSBEiJ_G0010312	pseudogene	Chr10:75522102-75522494 (-)

Homology

• Gene Tree
  Gm16221
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16221
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082234 (Evidence)
• NCBI Gene
  102638935

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082234	Ensembl Gene Model | MGI Sequence Detail	393	C57BL/6J
transcript	ENSMUST00000117331	Ensembl | MGI Sequence Detail	393	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87