Gm16183 Gene Detail

Summary

• Symbol
  Gm16183
• Name
  predicted gene 16183

• Feature Type
  lncRNA gene
• IDs
  MGI:3802174
  NCBI Gene: 115486889
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:85337831-85343813 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 41.02 cM

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802174	lncRNA gene	Chr8:85333761-85343972 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004571	antisense lncRNA gene	Chr8:85515114-85521057 (-)
A/J	MGP_AJ_G0004551	antisense lncRNA gene	Chr8:82155191-82161150 (-)
AKR/J	MGP_AKRJ_G0004535	antisense lncRNA gene	Chr8:84583912-84589835 (-)
BALB/cJ	MGP_BALBcJ_G0004536	antisense lncRNA gene	Chr8:82272586-82278508 (-)
C3H/HeJ	MGP_C3HHeJ_G0004485	antisense lncRNA gene	Chr8:85199186-85205132 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004685	antisense lncRNA gene	Chr8:88794477-88802216 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004136	antisense lncRNA gene	Chr8:75951327-75957307 (-)
CAST/EiJ	MGP_CASTEiJ_G0004444	antisense lncRNA gene	Chr8:84616562-84622523 (-)
CBA/J	MGP_CBAJ_G0004479	antisense lncRNA gene	Chr8:91852594-91858532 (-)
DBA/2J	MGP_DBA2J_G0004495	antisense lncRNA gene	Chr8:81793962-81799876 (-)
FVB/NJ	MGP_FVBNJ_G0004511	antisense lncRNA gene	Chr8:80731059-80736982 (-)
LP/J	MGP_LPJ_G0004575	antisense lncRNA gene	Chr8:85622932-85629568 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004500	antisense lncRNA gene	Chr8:94394641-94400630 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004685	antisense lncRNA gene	Chr8:84561495-84571940 (-)
PWK/PhJ	MGP_PWKPhJ_G0004396	antisense lncRNA gene	Chr8:81019210-81025558 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004337	antisense lncRNA gene	Chr8:83380423-83387696 (-)
WSB/EiJ	MGP_WSBEiJ_G0004484	antisense lncRNA gene	Chr8:84986798-84992733 (-)

Homology

• Gene Tree
  Gm16183
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16183
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  3

• Ensembl
  ENSMUSG00000086067 (Evidence)
• NCBI Gene
  115486889

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086067	Ensembl Gene Model | MGI Sequence Detail	5983	C57BL/6J
transcript	ENSMUST00000127527	Ensembl | MGI Sequence Detail	1193	Not Applicable

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;