Gm15950 Pseudogene Detail

Summary

• Symbol
  Gm15950
• Name
  predicted gene 15950

• Feature Type
  pseudogene
• IDs
  MGI:3802178
  NCBI Gene: 100416121
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:13737291-13739263 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 9.64 cM

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802178	pseudogene	Chr16:13737288-13739269 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040103	pseudogene	Chr16:10942707-10944679 (-)
A/J	MGP_AJ_G0040099	pseudogene	Chr16:10326255-10328227 (-)
AKR/J	MGP_AKRJ_G0040026	pseudogene	Chr16:10779673-10781645 (-)
BALB/cJ	MGP_BALBcJ_G0040082	pseudogene	Chr16:10505296-10507878 (-)
C3H/HeJ	MGP_C3HHeJ_G0039735	pseudogene	Chr16:10872471-10875353 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040678	pseudogene	Chr16:11090446-11092418 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037161	pseudogene	Chr16:10411721-10413419 (-)
CAST/EiJ	MGP_CASTEiJ_G0038824	pseudogene	Chr16:10895479-10900447 (-)
CBA/J	MGP_CBAJ_G0039702	pseudogene	Chr16:11624496-11626495 (-)
DBA/2J	MGP_DBA2J_G0039894	pseudogene	Chr16:10322910-10325163 (-)
FVB/NJ	MGP_FVBNJ_G0039855	pseudogene	Chr16:10305412-10307384 (-)
LP/J	MGP_LPJ_G0039943	pseudogene	Chr16:10830438-10832410 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039843	pseudogene	Chr16:11261097-11263069 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040768	pseudogene	Chr16:10746429-10748401 (-)
PWK/PhJ	MGP_PWKPhJ_G0038517	pseudogene	Chr16:10579348-10581557 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038235	pseudogene	Chr16:10735586-10737573 (-)
WSB/EiJ	MGP_WSBEiJ_G0039051	pseudogene	Chr16:10776553-10779996 (-)

Homology

• Gene Tree
  Gm15950
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089818 (Evidence)
• NCBI Gene
  100416121

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089818	Ensembl Gene Model | MGI Sequence Detail	1973	C57BL/6J
transcript	ENSMUST00000162902	Ensembl | MGI Sequence Detail	1973	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;