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Snora20 Gene Detail
Summary
  • Symbol
    Snora20
  • Name
    small nucleolar RNA, H/ACA box 20
  • Synonyms
    ACA20, MBI-125
Location &
Maps
more
  • Sequence Map
    Chr17:13141744-13141804 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 8.72 cM
Strain
Comparison
more
  • SNPs within 2kb
    68 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819492
 snoRNA gene Chr17:13141677-13141804 (+)
129S1/SvImJ MGP_129S1SvImJ_G0038884
 snoRNA gene Chr17:10593806-10593933 (+)
A/J MGP_AJ_G0038880
 snoRNA gene Chr17:10424381-10424508 (+)
AKR/J MGP_AKRJ_G0038814
 snoRNA gene Chr17:10259334-10259461 (+)
BALB/cJ MGP_BALBcJ_G0038862
 snoRNA gene Chr17:10207112-10207239 (+)
C3H/HeJ MGP_C3HHeJ_G0038526
 snoRNA gene Chr17:10504169-10504296 (+)
C57BL/6NJ MGP_C57BL6NJ_G0039411
 snoRNA gene Chr17:10994840-10994967 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036144
 snoRNA gene Chr17:4026902-4027029 (-)
CAST/EiJ MGP_CASTEiJ_G0037667
 snoRNA gene Chr17:10588323-10588450 (+)
CBA/J MGP_CBAJ_G0038498
 snoRNA gene Chr17:11413473-11413600 (+)
DBA/2J MGP_DBA2J_G0038686
 snoRNA gene Chr17:10061049-10061176 (+)
FVB/NJ MGP_FVBNJ_G0038639
 snoRNA gene Chr17:9998099-9998226 (+)
LP/J MGP_LPJ_G0038726
 snoRNA gene Chr17:10439743-10439870 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0038638
 snoRNA gene Chr17:11013497-11013624 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0039513
 snoRNA gene Chr17:10529129-10529256 (+)
PWK/PhJ MGP_PWKPhJ_G0037352
 snoRNA gene Chr17:9752908-9753035 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037108
 snoRNA gene Chr17:9959613-9959740 (+)
WSB/EiJ MGP_WSBEiJ_G0037895
 snoRNA gene Chr17:10842114-10842241 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100303746 NCBI Gene Model | MGI Sequence Detail 61 C57BL/6J ±  kb
transcript NR_028479 RefSeq | MGI Sequence Detail 61 Not Specified  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 8
    Phenotypes 1
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
  • Latest
    J:279720 Andergassen D, et al., The Airn lncRNA does not require any DNA elements within its locus to silence distant imprinted genes. PLoS Genet. 2019 Jul;15(7):e1008268
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory