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Snora21 Gene Detail
Summary
  • Symbol
    Snora21
  • Name
    small nucleolar RNA, H/ACA box 21
  • Synonyms
    ACA21, MBI-3
Location &
Maps
more
  • Sequence Map
    Chr11:97672465-97672592 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 61.10 cM
Strain
Comparison
more
  • SNPs within 2kb
    127 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819493
 snoRNA gene Chr11:97672465-97672601 (-)
129S1/SvImJ MGP_129S1SvImJ_G0038599
 snoRNA gene Chr11:100256506-100256642 (-)
A/J MGP_AJ_G0038590
 snoRNA gene Chr11:96110187-96110323 (-)
AKR/J MGP_AKRJ_G0038526
 snoRNA gene Chr11:99090914-99091050 (-)
BALB/cJ MGP_BALBcJ_G0038576
 snoRNA gene Chr11:96609843-96609979 (-)
C3H/HeJ MGP_C3HHeJ_G0038238
 snoRNA gene Chr11:99216843-99216979 (-)
C57BL/6NJ MGP_C57BL6NJ_G0039123
 snoRNA gene Chr11:103342430-103342566 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0037384
 snoRNA gene Chr11:100082536-100082672 (-)
CBA/J MGP_CBAJ_G0038210
 snoRNA gene Chr11:107621080-107621216 (-)
DBA/2J MGP_DBA2J_G0038400
 snoRNA gene Chr11:95664975-95665111 (-)
FVB/NJ MGP_FVBNJ_G0038351
 snoRNA gene Chr11:95157259-95157395 (-)
LP/J MGP_LPJ_G0038439
 snoRNA gene Chr11:100752551-100752687 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0038351
 snoRNA gene Chr11:107443526-107443662 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0039223
 snoRNA gene Chr11:99402894-99403030 (-)
PWK/PhJ MGP_PWKPhJ_G0037069
 snoRNA gene Chr11:96647603-96647739 (-)
SPRET/EiJ MGP_SPRETEiJ_G0036824
 snoRNA gene Chr11:99115117-99115253 (-)
WSB/EiJ MGP_WSBEiJ_G0037613
 snoRNA gene Chr11:99299470-99299606 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100302498 NCBI Gene Model | MGI Sequence Detail 128 C57BL/6J ±  kb
transcript NR_028078 RefSeq | MGI Sequence Detail 128 Not Specified  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 2
References
more
  • Summaries
    All 13
    Phenotypes 5
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:340213 Chanda K, et al., Altered Levels of Long NcRNAs Meg3 and Neat1 in Cell And Animal Models Of Huntington's Disease. RNA Biol. 2018;15(10):1348-1363
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory