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Snord118 Gene Detail
Summary
  • Symbol
    Snord118
  • Name
    small nucleolar RNA, C/D box 118
  • Synonyms
    MBI-34, U8
  • Feature Type
    snoRNA gene
  • IDs
    MGI:3819519
    NCBI Gene: 100216530
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:68964253-68964387 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 42.35 cM
Strain
Comparison
more
  • SNPs within 2kb
    111 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819519
 snoRNA gene Chr11:68964252-68964388 (+)
129S1/SvImJ MGP_129S1SvImJ_G0038576
 snoRNA gene Chr11:69479242-69479376 (+)
A/J MGP_AJ_G0038566
 snoRNA gene Chr11:66864341-66864475 (+)
AKR/J MGP_AKRJ_G0038503
 snoRNA gene Chr11:68863457-68863591 (+)
BALB/cJ MGP_BALBcJ_G0038553
 snoRNA gene Chr11:67186395-67186529 (+)
C3H/HeJ MGP_C3HHeJ_G0038215
 snoRNA gene Chr11:68884024-68884158 (+)
C57BL/6NJ MGP_C57BL6NJ_G0039091
 snoRNA gene Chr11:71589001-71589135 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0035866
 snoRNA gene Chr11:63803922-63804056 (+)
CAST/EiJ MGP_CASTEiJ_G0037360
 snoRNA gene Chr11:69123505-69123639 (+)
CBA/J MGP_CBAJ_G0038187
 snoRNA gene Chr11:74796519-74796653 (+)
DBA/2J MGP_DBA2J_G0038377
 snoRNA gene Chr11:66464561-66464695 (+)
FVB/NJ MGP_FVBNJ_G0038328
 snoRNA gene Chr11:66085736-66085870 (+)
LP/J MGP_LPJ_G0038417
 snoRNA gene Chr11:70065960-70066094 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0038328
 snoRNA gene Chr11:75426607-75426741 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0039200
 snoRNA gene Chr11:69111399-69111533 (+)
PWK/PhJ MGP_PWKPhJ_G0037046
 snoRNA gene Chr11:67100503-67100637 (+)
SPRET/EiJ MGP_SPRETEiJ_G0036801
 snoRNA gene Chr11:68947433-68947567 (+)
WSB/EiJ MGP_WSBEiJ_G0037591
 snoRNA gene Chr11:68754584-68754718 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotypes from 1 allele in 1 genetic background
    1 phenotype reference
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      24
    • RefSeq
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000064899 Ensembl Gene Model | MGI Sequence Detail 135 C57BL/6J ±  kb
    transcript ENSMUST00000082965 Ensembl | MGI Sequence Detail 135 Not Applicable  
    For the selected sequence
    References
    more
    • Summaries
      All 7
      Phenotypes 1
    • Earliest
      J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
    • Latest
      J:344970 Zhang W, et al., Recapitulating and reversing human brain ribosomopathy defects via the maladaptive integrated stress response. Sci Adv. 2024 Feb 2;10(5):eadk1034
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory