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Snord45c Gene Detail
Summary
  • Symbol
    Snord45c
  • Name
    small nucleolar RNA, C/D box 45C
  • Synonyms
    MBII-401, U45C
  • Feature Type
    snoRNA gene
  • IDs
    MGI:3819536
    NCBI Gene: 100217425
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:153617766-153617826 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 78.76 cM
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819536
 snoRNA gene Chr3:153617762-153617841 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039148
 snoRNA gene Chr3:157879373-157879452 (-)
A/J MGP_AJ_G0039144
 snoRNA gene Chr3:152129641-152129720 (-)
AKR/J MGP_AKRJ_G0039075
 snoRNA gene Chr3:156202873-156202952 (-)
BALB/cJ MGP_BALBcJ_G0039127
 snoRNA gene Chr3:151938935-151939014 (-)
C3H/HeJ MGP_C3HHeJ_G0038788
 snoRNA gene Chr3:156569352-156569431 (-)
C57BL/6NJ MGP_C57BL6NJ_G0039675
 snoRNA gene Chr3:163021903-163021982 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036383
 snoRNA gene Chr3:146904302-146904381 (-)
CAST/EiJ MGP_CASTEiJ_G0037923
 snoRNA gene Chr3:156682180-156682259 (-)
CBA/J MGP_CBAJ_G0038759
 snoRNA gene Chr3:168902404-168902483 (-)
DBA/2J MGP_DBA2J_G0038944
 snoRNA gene Chr3:151211390-151211469 (-)
FVB/NJ MGP_FVBNJ_G0038899
 snoRNA gene Chr3:148590371-148590450 (-)
LP/J MGP_LPJ_G0038989
 snoRNA gene Chr3:159208525-159208604 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0038901
 snoRNA gene Chr3:177369584-177369663 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0039774
 snoRNA gene Chr3:155844515-155844594 (-)
PWK/PhJ MGP_PWKPhJ_G0037612
 snoRNA gene Chr3:151126832-151126911 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037361
 snoRNA gene Chr3:154000193-154000272 (-)
WSB/EiJ MGP_WSBEiJ_G0038152
 snoRNA gene Chr3:156829485-156829564 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100217425 NCBI Gene Model | MGI Sequence Detail 61 C57BL/6J ±  kb
transcript NR_028525 RefSeq | MGI Sequence Detail 61 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory