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Snord47 Gene Detail
Summary
  • Symbol
    Snord47
  • Name
    small nucleolar RNA, C/D box 47
  • Synonyms
    MBII-96, U47
Location &
Maps
more
  • Sequence Map
    Chr1:160865662-160865726 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 69.75 cM
Strain
Comparison
more
  • SNPs within 2kb
    168 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819537
 snoRNA gene Chr1:160865652-160865728 (+)
129S1/SvImJ MGP_129S1SvImJ_G0038460
 snoRNA gene Chr1:166289180-166289256 (+)
A/J MGP_AJ_G0038450
 snoRNA gene Chr1:159521525-159521601 (+)
AKR/J MGP_AKRJ_G0038388
 snoRNA gene Chr1:164389856-164389932 (+)
BALB/cJ MGP_BALBcJ_G0038437
 snoRNA gene Chr1:160063190-160063266 (+)
C3H/HeJ MGP_C3HHeJ_G0038100
 snoRNA gene Chr1:164591042-164591118 (+)
C57BL/6NJ MGP_C57BL6NJ_G0038975
 snoRNA gene Chr1:171935669-171935745 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0035756
 snoRNA gene Chr1:151639593-151639670 (+)
CAST/EiJ MGP_CASTEiJ_G0037245
 snoRNA gene Chr1:164200086-164200162 (+)
CBA/J MGP_CBAJ_G0038072
 snoRNA gene Chr1:178017528-178017604 (+)
DBA/2J MGP_DBA2J_G0038263
 snoRNA gene Chr1:158500910-158500986 (+)
FVB/NJ MGP_FVBNJ_G0038213
 snoRNA gene Chr1:156910052-156910128 (+)
LP/J MGP_LPJ_G0038302
 snoRNA gene Chr1:167378995-167379071 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0038212
 snoRNA gene Chr1:185591017-185591093 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0039084
 snoRNA gene Chr1:164208560-164208636 (+)
PWK/PhJ MGP_PWKPhJ_G0036930
 snoRNA gene Chr1:157656935-157657011 (+)
SPRET/EiJ MGP_SPRETEiJ_G0036686
 snoRNA gene Chr1:163103969-163104046 (+)
WSB/EiJ MGP_WSBEiJ_G0037476
 snoRNA gene Chr1:164399667-164399743 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100217446 NCBI Gene Model | MGI Sequence Detail 65 C57BL/6J ±  kb
transcript NR_028543 RefSeq | MGI Sequence Detail 65 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory