Gm15569 Gene Detail

Summary

• Symbol
  Gm15569
• Name
  predicted gene 15569

• Feature Type
  lncRNA gene
• IDs
  MGI:3826526
  NCBI Gene: 102638208
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:86069929-86071353 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 40.55 cM

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826526	lncRNA gene	Chr15:86069929-86071397 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003301	antisense lncRNA gene	Chr15:87144919-87146343 (+)
A/J	MGP_AJ_G0003277	antisense lncRNA gene	Chr15:83870248-83871670 (+)
AKR/J	MGP_AKRJ_G0003260	antisense lncRNA gene	Chr15:86342761-86344183 (+)
BALB/cJ	MGP_BALBcJ_G0003266	antisense lncRNA gene	Chr15:83996920-83998344 (+)
C3H/HeJ	MGP_C3HHeJ_G0003219	antisense lncRNA gene	Chr15:86296914-86298336 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003408	antisense lncRNA gene	Chr15:90378209-90379633 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002930	antisense lncRNA gene	Chr15:80171923-80173336 (+)
CAST/EiJ	MGP_CASTEiJ_G0003185	antisense lncRNA gene	Chr15:87120951-87122369 (+)
CBA/J	MGP_CBAJ_G0003216	antisense lncRNA gene	Chr15:93429153-93430575 (+)
DBA/2J	MGP_DBA2J_G0003221	antisense lncRNA gene	Chr15:83325208-83326626 (+)
FVB/NJ	MGP_FVBNJ_G0003240	antisense lncRNA gene	Chr15:82411646-82413068 (+)
LP/J	MGP_LPJ_G0003294	antisense lncRNA gene	Chr15:87292257-87293681 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003229	antisense lncRNA gene	Chr15:98043846-98045268 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003410	antisense lncRNA gene	Chr15:86369728-86371152 (+)
PWK/PhJ	MGP_PWKPhJ_G0003142	antisense lncRNA gene	Chr15:83349473-83350898 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003088	antisense lncRNA gene	Chr15:86073320-86074749 (+)
WSB/EiJ	MGP_WSBEiJ_G0003219	antisense lncRNA gene	Chr15:86849206-86850628 (+)

Homology

• Gene Tree
  Gm15569
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  20 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm15569
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000086424 (Evidence)
• NCBI Gene
  102638208

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086424	Ensembl Gene Model | MGI Sequence Detail	1425	C57BL/6J
transcript	ENSMUST00000133675	Ensembl | MGI Sequence Detail	594	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 27

  Diseases 1

  Phenotypes 20
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27