Gm16301 Pseudogene Detail

Summary

• Symbol
  Gm16301
• Name
  predicted gene 16301

• Feature Type
  pseudogene
• IDs
  MGI:3826534
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:59651719-59652013 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 31.48 cM

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826534	pseudogene	Chr14:59651719-59652013 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011123	pseudogene	Chr14:53714256-53714550 (-)
A/J	MGP_AJ_G0011119	pseudogene	Chr14:52588607-52588901 (-)
AKR/J	MGP_AKRJ_G0011078	pseudogene	Chr14:54448568-54448862 (-)
BALB/cJ	MGP_BALBcJ_G0011089	pseudogene	Chr14:52550061-52550355 (-)
C3H/HeJ	MGP_C3HHeJ_G0010989	pseudogene	Chr14:54102149-54102443 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011382	pseudogene	Chr14:56387249-56387543 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010808	pseudogene	Chr14:50515764-50518732 (-)
CBA/J	MGP_CBAJ_G0010966	pseudogene	Chr14:57976021-57976315 (-)
DBA/2J	MGP_DBA2J_G0011013	pseudogene	Chr14:52258417-52258711 (-)
FVB/NJ	MGP_FVBNJ_G0011017	pseudogene	Chr14:51672981-51673275 (-)
LP/J	MGP_LPJ_G0011102	pseudogene	Chr14:54745246-54745540 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011007	pseudogene	Chr14:57392116-57392410 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011359	pseudogene	Chr14:53595722-53596016 (-)
PWK/PhJ	MGP_PWKPhJ_G0010677	pseudogene	Chr14:48896780-48897074 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010855	pseudogene	Chr14:53910597-53910891 (-)

Homology

• Gene Tree
  Gm16301
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16301
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000089643 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089643	Ensembl Gene Model | MGI Sequence Detail	295	C57BL/6J
transcript	ENSMUST00000161959	Ensembl | MGI Sequence Detail	295	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;